RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 RAD51CO43502 376 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ITGA2BP08514 1039 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 CTPS1P17812 591 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LHCGRP22888 699 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 SLC7A5Q01650 507 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LRRC66Q68CR7 880 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ZNF765Q7L2R6 523 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 NLRP8Q86W28 1048 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 VSIG1Q86XK7 387 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 SLC13A5Q86YT5 568 aaPredicted RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 CCDC13Q8IYE1 715 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 KATNAL2Q8IYT4 538 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 NRSN1Q8IZ57 195 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LSM14AQ8ND56 463 aaKnown RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 FAF2Q96CS3 445 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 HDAC11Q96DB2 347 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 DDX47Q9H0S4 455 aaKnown RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 CDH19Q9H159 772 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 EPB41L5Q9HCM4 733 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 AKAP7Q9P0M2 348 aaPredicted RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LRIT1Q9P2V4 623 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 SHROOM3Q8TF72 1996 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 A0A0J9YYE9 177 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ZNF487B1APH4 448 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 TK2O00142 265 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 PLD2O14939 933 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 KLK10O43240 276 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 TNFSF15O95150 251 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 TRBC1P01850 177 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ZFXP17010 805 aaPredicted RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 GNPDA1P46926 289 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 CXADRP78310 365 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 CCL7P80098 99 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ATP13A4Q4VNC1 1196 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LRRC38Q5VT99 294 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ADAMTSL4Q6UY14 1074 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 FBXO39Q8N4B4 442 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 Q8N9G6 341 aaPredicted RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 GPBAR1Q8TDU6 330 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 ADGRE3Q9BY15 652 aa20.38■□□□□ 0.85
PTPRU-203ENST00000415600 FRMD8Q9BZ67 464 aaPredicted RBP20.38■□□□□ 0.85
PTPRU-203ENST00000415600 LRP4O75096 1905 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 LRRD1A4D1F6 860 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 RHPN2P1A8MT19 583 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 FZD6O60353 706 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CEACAM5P06731 702 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 IVLP07476 585 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 HOXB3P14651 431 aaPredicted RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 KDELR1P24390 212 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CCKBRP32239 447 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 MRPS25P82663 173 aaKnown RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 COL9A2Q14055 689 aaPredicted RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 HLTFQ14527 1009 aaKnown RBP eCLIP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CLPPQ16740 277 aaPredicted RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 RAB11FIP2Q7L804 512 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 TECPR1Q7Z6L1 1165 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 TSPAN33Q86UF1 283 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 IFT20Q8IY31 132 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CCHCR1Q8TD31 782 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CRELD1Q96HD1 420 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 TDRD1Q9BXT4 1180 aaKnown RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 SUDS3Q9H7L9 328 aaPredicted RBP20.37■□□□□ 0.85
PTPRU-203ENST00000415600 SUFUQ9UMX1 484 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 SLC17A4Q9Y2C5 497 aa20.37■□□□□ 0.85
PTPRU-203ENST00000415600 CAPN8A6NHC0 703 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 BHMG1C9JSJ3 638 aaPredicted RBP20.36■□□□□ 0.85
PTPRU-203ENST00000415600 NOBOXO60393 691 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 PHF2O75151 1096 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 JMJD7P0C870 316 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 DSC2Q02487 901 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 CYP1B1Q16678 543 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 MAATS1Q7Z4T9 603 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 SPRED1Q7Z699 444 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 EXD1Q8NHP7 514 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 ZDHHC1Q8WTX9 485 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 RNF157Q96PX1 679 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 PCDH9Q9HC56 1237 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 RABGEF1Q9UJ41 708 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 CHKBQ9Y259 395 aa20.36■□□□□ 0.85
PTPRU-203ENST00000415600 FASNP49327 2511 aaKnown RBP20.36■□□□□ 0.85
PTPRU-203ENST00000415600 PPP1R12AO14974 1030 aaPredicted RBP20.35■□□□□ 0.85
PTPRU-203ENST00000415600 PDHA1P08559 390 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 PDX1P52945 283 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 GBE1Q04446 702 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 LRP8Q14114 963 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 PDK1Q15118 436 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 SIX1Q15475 284 aaPredicted RBP20.35■□□□□ 0.85
PTPRU-203ENST00000415600 KCTD16Q68DU8 428 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 CLEC14AQ86T13 490 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 MAIP1Q8WWC4 291 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 CMKLR1Q99788 373 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 FUT8Q9BYC5 575 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 BRD8Q9H0E9 1235 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 DTLQ9NZJ0 730 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 TAAR2Q9P1P5 351 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 RNF215Q9Y6U7 377 aa20.35■□□□□ 0.85
PTPRU-203ENST00000415600 CDRT15L2A8MXV6 281 aa20.34■□□□□ 0.85
PTPRU-203ENST00000415600 APOL1O14791 398 aa20.34■□□□□ 0.85
PTPRU-203ENST00000415600 ATXN7O15265 892 aaPredicted RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms