RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 CHRNA6Q15825 494 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 DBN1Q16643 649 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 GPR33Q49SQ1 333 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 HSF5Q4G112 596 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 FBXO43Q4G163 708 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TMEM52BQ4KMG9 183 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SLC44A4Q53GD3 710 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TAF1BQ53T94 588 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 PPM1JQ5JR12 505 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CTSL3PQ5NE16 218 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 HENMT1Q5T8I9 393 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 HECTD2Q5U5R9 776 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 AGBL4Q5VU57 503 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TTC19Q6DKK2 380 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ZNF549Q6P9A3 640 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 LIPIQ6XZB0 460 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CERS6Q6ZMG9 384 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RAPH1Q70E73 1250 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TAS2R42Q7RTR8 314 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SERPINA9Q86WD7 417 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CEP97Q8IW35 865 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RAVER1Q8IY67 606 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 NXPE1Q8N323 547 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 TXNDC5Q8NBS9 432 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 RPLP0P6Q8NHW5 317 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 DTX3LQ8TDB6 740 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RAB7BQ96AH8 199 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 FAM131CQ96AQ9 280 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CENPTQ96BT3 561 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CCDC97Q96F63 343 aaPredicted RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 TSPAN17Q96FV3 270 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 COQ10AQ96MF6 247 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 BIRC8Q96P09 236 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 FAM111AQ96PZ2 611 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 AARSD1Q9BTE6 412 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 WRAP53Q9BUR4 548 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 SLC13A1Q9BZW2 595 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 MKRN2Q9H000 416 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 CDH19Q9H159 772 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 P2RY12Q9H244 342 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 VPS11Q9H270 941 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 C12orf65Q9H3J6 166 aaKnown RBP6.61□□□□□ -1.35
VPS41-204ENST00000413141 ASB8Q9H765 288 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 MLXIPLQ9NP71 852 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ARHGEF3Q9NR81 526 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 RAD18Q9NS91 495 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SMOXQ9NWM0 555 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SLC17A7Q9P2U7 560 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 SERGEFQ9UGK8 458 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CD84Q9UIB8 345 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CRLS1Q9UJA2 301 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 GRID1Q9ULK0 1009 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 ANKRD6Q9Y2G4 727 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 CRYL1Q9Y2S2 319 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
VPS41-204ENST00000413141 IGLV3-16A0A075B6K0 115 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 A0A087X1B8 175 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 A0A1W2PP55 124 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 GOLGA8CPA6NN73 597 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 A6NNZ2 444 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 MAN2B1O00754 1011 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 NEMP1O14524 444 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 PRMT5O14744 637 aaPredicted RBP6.6□□□□□ -1.35
VPS41-204ENST00000413141 WNT9AO14904 365 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 AP1G1O43747 822 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 OR1I1O60431 355 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ESR1P03372 595 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 GSTA1P08263 222 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 DHRS4L1P0CG22 281 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 C6P13671 934 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ZNF7P17097 686 aaPredicted RBP6.6□□□□□ -1.35
VPS41-204ENST00000413141 UGT1A6P19224 532 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 CD72P21854 359 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 UGT1A1P22309 533 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 UGT1A4P22310 534 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 RPS3P23396 243 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS41-204ENST00000413141 FMO4P31512 558 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 LSP1P33241 339 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 UGT1A3P35503 534 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 UGT1A5P35504 534 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 GMPRP36959 345 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 PPARGP37231 505 aaPredicted RBP6.6□□□□□ -1.35
VPS41-204ENST00000413141 CCT5P48643 541 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 LIG3P49916 1009 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 TAS2R38P59533 333 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 TIAL1Q01085 375 aaKnown RBP eCLIP6.6□□□□□ -1.35
VPS41-204ENST00000413141 IL9RQ01113 521 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 PRKCQQ04759 706 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ITIH4Q14624 930 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ACOX1Q15067 660 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 INSCQ1MX18 579 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ZNF284Q2VY69 593 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 TUBB8Q3ZCM7 444 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 ATP13A5Q4VNC0 1218 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 EOGTQ5NDL2 527 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 N4BP2L1Q5TBK1 243 aaPredicted RBP6.6□□□□□ -1.35
VPS41-204ENST00000413141 LYPLAL1Q5VWZ2 237 aa6.6□□□□□ -1.35
VPS41-204ENST00000413141 LVRNQ6Q4G3 990 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms