RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 PPM1JQ5JR12 505 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 CERCAMQ5T4B2 595 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 ADAMTSL4Q6UY14 1074 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 PPP1R21Q6ZMI0 780 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 DGLUCYQ7Z3D6 616 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 DCP2Q8IU60 420 aaKnown RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 KLHL7Q8IXQ5 586 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 TRAM1L1Q8N609 369 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 PNPLA1Q8N8W4 532 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 ATL2Q8NHH9 583 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 BAHD1Q8TBE0 780 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 NAT14Q8WUY8 206 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 CCDC97Q96F63 343 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 HIC2Q96JB3 615 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 DNAJC1Q96KC8 554 aaKnown RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 PPP1R2P1Q96PQ5 205 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 KCNK17Q96T54 332 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 NAP1L3Q99457 506 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 SPATA16Q9BXB7 569 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 TMEM168Q9H0V1 697 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 TRABDQ9H4I3 376 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 CARS2Q9HA77 564 aaKnown RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 UGT1A7Q9HAW7 530 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 UGT1A10Q9HAW8 530 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 UGT1A8Q9HAW9 530 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 ARNT2Q9HBZ2 717 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 IL26Q9NPH9 171 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 CASS4Q9NQ75 786 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 HOMER3Q9NSC5 361 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 HACD3Q9P035 362 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 NFKBIL1Q9UBC1 381 aaPredicted RBP7.66□□□□□ -1.18
CPSF4-202ENST00000412686 SUFUQ9UMX1 484 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 PRKAB1Q9Y478 270 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 ST14Q9Y5Y6 855 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 KNL1Q8NG31 2342 aa7.66□□□□□ -1.18
CPSF4-202ENST00000412686 GLYATL1P3A0A0U1RQE8 302 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 MED19A0JLT2 244 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 RGSL1A5PLK6 1076 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 OR51F1A6NGY5 319 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CASC3O15234 703 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 YKT6O15498 198 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 PSMD3O43242 534 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 AQP9O43315 295 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SIGLEC6O43699 453 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 ASMTLO95671 621 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 TOP3BO95985 862 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 TNFP01375 233 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 HOXC4P09017 264 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CTSEP14091 401 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 ZNF8P17098 575 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 COL5A1P20908 1838 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SDHBP21912 280 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 LPOP22079 712 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 AK4P27144 223 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 PTGIRP43119 386 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 FNTAP49354 379 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CDKN1CP49918 316 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 ARSDP51689 593 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SESN2P58004 480 aaPredicted RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 HNRNPKP61978 463 aaKnown RBP eCLIP7.65□□□□□ -1.183e-6■■■■□ 21
CPSF4-202ENST00000412686 CRADDP78560 199 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 LSM11P83369 360 aaKnown RBP eCLIP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 C2orf54Q08AI8 447 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 PEX6Q13608 980 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 KCNJ11Q14654 390 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SUZ12Q15022 739 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SMAD1Q15797 465 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CCDC157Q569K6 752 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 NLRP8Q86W28 1048 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 RAVER1Q8IY67 606 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 DNAAF3Q8N9W5 541 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 BRSK1Q8TDC3 778 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CPT1BQ92523 772 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 GLYATL1Q969I3 302 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 CNDP2Q96KP4 475 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 ZNF778Q96MU6 729 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 PLEKHG4BQ96PX9 1271 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SRPK1Q96SB4 655 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 TRIM56Q9BRZ2 755 aaKnown RBP7.65□□□□□ -1.18
CPSF4-202ENST00000412686 TRIM51Q9BSJ1 452 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SLC13A1Q9BZW2 595 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SLC32A1Q9H598 525 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 FAM96AQ9H5X1 160 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 TOR4AQ9NXH8 423 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 KCTD5Q9NXV2 234 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SIRPGQ9P1W8 387 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 ATXN10Q9UBB4 475 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SPASTQ9UBP0 616 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SLC2A6Q9UGQ3 507 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 SLC17A4Q9Y2C5 497 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 PKP3Q9Y446 797 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 DGKBQ9Y6T7 804 aa7.65□□□□□ -1.18
CPSF4-202ENST00000412686 DNAH14Q0VDD8 3507 aa7.64□□□□□ -1.19
CPSF4-202ENST00000412686 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.64□□□□□ -1.19
CPSF4-202ENST00000412686 LY6G6EA0A0G2JKS1 128 aa7.64□□□□□ -1.19
CPSF4-202ENST00000412686 C2orf81A6NN90 581 aa7.64□□□□□ -1.19
CPSF4-202ENST00000412686 ERI2A8K979 691 aaKnown RBP7.64□□□□□ -1.19
CPSF4-202ENST00000412686 GOLGA8MH3BSY2 632 aa7.64□□□□□ -1.19
CPSF4-202ENST00000412686 TNFRSF10CO14798 259 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms