RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 MYADML2A6NDP7 307 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 EEDO75530 441 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 IGLV3-27P01718 113 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CYBBP04839 570 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CD52P31358 61 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 MAGEA11P43364 429 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 PLOD1Q02809 727 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 GEN1Q17RS7 908 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 SLC39A12Q504Y0 691 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 TTC33Q6PID6 262 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 TXNDC11Q6PKC3 985 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 GPR141Q7Z602 305 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 TBC1D21Q8IYX1 336 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 RYBPQ8N488 228 aaPredicted RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 FBXO39Q8N4B4 442 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CDKN2AIPNLQ96HQ2 116 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 RETREG1Q9H6L5 497 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 TAS2R13Q9NYV9 303 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 ARL5AQ9Y689 179 aa16.61■□□□□ 0.25
LIMS2-208ENST00000410011 MRPL42Q9Y6G3 142 aaKnown RBP16.61■□□□□ 0.25
LIMS2-208ENST00000410011 GLTPD2A6NH11 291 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 SAC3D1A6NKF1 404 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 TMEM189-UBE2V1I3L0A0 370 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 SNAP91O60641 907 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 XKR7Q5GH72 579 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 PRR23BQ6ZRT6 265 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF598Q86UK7 904 aaKnown RBP16.6■□□□□ 0.25
LIMS2-208ENST00000410011 PPP1R14BQ96C90 147 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 NSUN5Q96P11 429 aaKnown RBP16.6■□□□□ 0.25
LIMS2-208ENST00000410011 TRIB3Q96RU7 358 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 PREBQ9HCU5 417 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 NLE1Q9NVX2 485 aaPredicted RBP16.6■□□□□ 0.25
LIMS2-208ENST00000410011 GALNT8Q9NY28 637 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF639Q9UID6 485 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 CDH7Q9ULB5 785 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 PTGDR2Q9Y5Y4 395 aa16.6■□□□□ 0.25
LIMS2-208ENST00000410011 NDST3O95803 873 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 MLYCDO95822 493 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 LINC00032P0C843 101 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 EEF1DP29692 281 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 RFC2P35250 354 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ZFP36L2P47974 494 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 KCNK10P57789 538 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 NKX3-2P78367 333 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 RING1Q06587 406 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 EML3Q32P44 896 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 PDCD4Q53EL6 469 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 SETMARQ53H47 684 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 EGFL6Q8IUX8 553 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 LEMD2Q8NC56 503 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF420Q8TAQ5 688 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 BLOC1S5Q8TDH9 187 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ALG2Q9H553 416 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 IL1RL2Q9HB29 575 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 PDFQ9HBH1 243 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 EGFL7Q9UHF1 273 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 MED16Q9Y2X0 877 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 MYO16Q9Y6X6 1858 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 RNF103-CHMP3A0A140T963 221 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 LRRC14BA6NHZ5 514 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ESRRBO95718 433 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 SERPINF2P08697 491 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 UROSP10746 265 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 GSK3BP49841 420 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 RAD51Q06609 339 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 CAPRIN1Q14444 709 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 PATL1Q86TB9 770 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 NKAPQ8N5F7 415 aaKnown RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 OR13C4Q8NGS5 318 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 FAM110BQ8TC76 370 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 SOCS4Q8WXH5 440 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 EXT2Q93063 718 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 DOK1Q99704 481 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ADAM2Q99965 735 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ABI2Q9NYB9 513 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ZIM2Q9NZV7 527 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 ZNHIT2Q9UHR6 403 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 LEF1Q9UJU2 399 aaPredicted RBP16.59■□□□□ 0.25
LIMS2-208ENST00000410011 RNF112Q9ULX5 631 aa16.59■□□□□ 0.25
LIMS2-208ENST00000410011 HTR1EP28566 365 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 LPIN1Q14693 890 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 TBC1D25Q3MII6 688 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 CXCL17Q6UXB2 119 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 GPR180Q86V85 440 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 PROSER1Q86XN7 944 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 ZNF354CQ86Y25 554 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 TMEM199Q8N511 208 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 TERB1Q8NA31 727 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 RNF217Q8TC41 542 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 KCNA7Q96RP8 456 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.58■□□□□ 0.25
LIMS2-208ENST00000410011 GMIPQ9P107 970 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 GIMAP2Q9UG22 337 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 VPS9D1Q9Y2B5 631 aa16.58■□□□□ 0.25
LIMS2-208ENST00000410011 MUSKO15146 869 aa16.58■□□□□ 0.24
LIMS2-208ENST00000410011 SOAT2O75908 522 aa16.58■□□□□ 0.24
LIMS2-208ENST00000410011 CHEK2O96017 543 aa16.58■□□□□ 0.24
LIMS2-208ENST00000410011 GNAO1P09471 354 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms