RNA–Protein interactions for RNA: ENST00000409960.6

SERF2-210, Transcript of small EDRK-rich factor 2, humanhuman

TSL 1 (best) BASIC

Gene SERF2, Length 1,032 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-210ENST00000409960 PRKCIP41743 596 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 RPL26P61254 145 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 MC2RQ01718 297 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 PTSQ03393 145 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 ABHD18Q0P651 414 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 MMRN1Q13201 1228 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 SEPT6Q14141 434 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 SMTNL2Q2TAL5 461 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 ANKS6Q68DC2 871 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 TIGD7Q6NT04 549 aaPredicted RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 APTXQ7Z2E3 356 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 ARHGAP22Q7Z5H3 698 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 SLC9B2Q86UD5 537 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 TEX26Q8N6G2 289 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 C9orf43Q8TAL5 461 aaPredicted RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 APOBEC4Q8WW27 367 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 HSPH1Q92598 858 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 PMEPA1Q969W9 287 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 KCTD12Q96CX2 325 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 RTP4Q96DX8 246 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 COX14Q96I36 57 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 TRIM7Q9C029 511 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 NAT10Q9H0A0 1025 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 HAUS4Q9H6D7 363 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 LMBRD1Q9NUN5 540 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 OCIAD1Q9NX40 245 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 RPL26L1Q9UNX3 145 aaKnown RBP11.68□□□□□ -0.54
SERF2-210ENST00000409960 TMEM98Q9Y2Y6 226 aa11.68□□□□□ -0.54
SERF2-210ENST00000409960 NBASA2RRP1 2371 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 KIR2DS5A0A0G2JLQ3 304 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 A0A0G2JNG1 304 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 CYSRT1A8MQ03 144 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 KIR2DS3K7RE56 304 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 MAP3K6O95382 1288 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 ASMTLO95671 621 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 CTPS1P17812 591 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 MPSTP25325 297 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 IL1R2P27930 398 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 STC1P52823 247 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 SRSF1Q07955 248 aaKnown RBP eCLIP11.67□□□□□ -0.542e-7■□□□□ 9.9
SERF2-210ENST00000409960 ITKQ08881 620 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 KLHL30Q0D2K2 578 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 CDC20Q12834 499 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 MAP7Q14244 749 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 KIR2DS5Q14953 304 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 FILIP1LQ4L180 1135 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 ALG1LQ6GMV1 187 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 MARK2Q7KZI7 788 aaKnown RBP11.67□□□□□ -0.54
SERF2-210ENST00000409960 ZNF571Q7Z3V5 609 aaPredicted RBP11.67□□□□□ -0.54
SERF2-210ENST00000409960 KDELC2Q7Z4H8 507 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 PLXDC1Q8IUK5 500 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 NIPA2Q8N8Q9 360 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 SCAMP4Q969E2 229 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 FATE1Q969F0 183 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 LYSMD1Q96S90 227 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 SPRY4Q9C004 299 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 EPN3Q9H201 632 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 NT5MQ9NPB1 228 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 ETNK2Q9NVF9 386 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 TMEM9Q9P0T7 183 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 MYO1AQ9UBC5 1043 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 ZNHIT2Q9UHR6 403 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 CD84Q9UIB8 345 aa11.67□□□□□ -0.54
SERF2-210ENST00000409960 TMEM184BQ9Y519 407 aaPredicted RBP11.67□□□□□ -0.54
SERF2-210ENST00000409960 RGSL1A5PLK6 1076 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 DDX3XO00571 662 aaKnown RBP eCLIP11.66□□□□□ -0.543e-40■■□□□ 13.7
SERF2-210ENST00000409960 POLR1CO15160 346 aaPredicted RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 DNAJC6O75061 913 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PDHA1P08559 390 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 RARAP10276 462 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 F3P13726 295 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 GARSP41250 739 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 ZNF165P49910 485 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 UBAP2LQ14157 1087 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 KRT81Q14533 505 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 NCAPHQ15003 741 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 SNAP47Q5SQN1 464 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 CCDC122Q5T0U0 273 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 IYDQ6PHW0 289 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 THSD4Q6ZMP0 1018 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 CHST15Q7LFX5 561 aaPredicted RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 LYSMD3Q7Z3D4 306 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 TRIM74Q86UV6 250 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PTRH1Q86Y79 214 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 PHYKPLQ8IUZ5 450 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 ESX1Q8N693 406 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 CCHCR1Q8TD31 782 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 NCSTNQ92542 709 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 RNF166Q96A37 237 aaPredicted RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 RIOK2Q9BVS4 552 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 REPIN1Q9BWE0 567 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 TDRD1Q9BXT4 1180 aaKnown RBP11.66□□□□□ -0.54
SERF2-210ENST00000409960 ISCUQ9H1K1 167 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PCDH18Q9HCL0 1135 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PKD2L2Q9NZM6 624 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 IP6K2Q9UHH9 426 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PLEKHM1Q9Y4G2 1056 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 PCDHB3Q9Y5E6 796 aa11.66□□□□□ -0.54
SERF2-210ENST00000409960 LILRA5A6NI73 299 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms