RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 ZNF284Q2VY69 593 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM153CQ494X1 144 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 STEAP4Q687X5 459 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 ESRP1Q6NXG1 681 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 UNC5AQ6ZN44 842 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 TRMT10CQ7L0Y3 403 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 IGDCC3Q8IVU1 814 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 DENND6BQ8NEG7 585 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 GSDMBQ8TAX9 411 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 AP2M1Q96CW1 435 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 CDKN2AIPNLQ96HQ2 116 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 C9orf72Q96LT7 481 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 WDR83Q9BRX9 315 aaKnown RBP16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 ZSCAN5AQ9BUG6 496 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 EBF2Q9HAK2 575 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 TM9SF3Q9HD45 589 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 FSCN3Q9NQT6 498 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 SLC2A6Q9UGQ3 507 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 DMTF1Q9Y222 760 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 COQ6Q9Y2Z9 468 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 SLCO1B1Q9Y6L6 691 aa16.44■□□□□ 0.22
TSPAN4-208ENST00000409531 CACNA1EQ15878 2313 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 KNL1Q8NG31 2342 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 GLYATL1P3A0A0U1RQE8 302 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 CCDC151A5D8V7 595 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 GM2AP17900 193 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 MAT2AP31153 395 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 PHBP35232 272 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 CSNK1EP49674 416 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 PMS2P54278 862 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 RACK1P63244 317 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 DPTQ07507 201 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 ITGA9Q13797 1035 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 FRG1Q14331 258 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 PTPRCAPQ14761 206 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 LRRC14Q15048 493 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 TEAD4Q15561 434 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 PDPK2PQ6A1A2 396 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 AFTPHQ6ULP2 937 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 CES3Q6UWW8 571 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 DGLUCYQ7Z3D6 616 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 GPR26Q8NDV2 337 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 OR6P1Q8NGX9 317 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 CALML6Q8TD86 181 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 AENQ8WTP8 325 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 HDAC10Q969S8 669 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 SGSM3Q96HU1 749 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 TBATAQ96M53 351 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 LENG8Q96PV6 779 aaPredicted RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 GTPBP2Q9BX10 602 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 ABCG8Q9H221 673 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 CDC42EP4Q9H3Q1 356 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 IL26Q9NPH9 171 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 FKBPLQ9UIM3 349 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 FNDC3AQ9Y2H6 1198 aaKnown RBP16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 SLC30A1Q9Y6M5 507 aa16.43■□□□□ 0.22
TSPAN4-208ENST00000409531 ZCWPW2A0A1B0GU75 182 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 DCDC2BA2VCK2 349 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 VAPBO95292 243 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 PAK4O96013 591 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 ITGALP20701 1170 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 HNRNPA2B1P22626 353 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 AKT2P31751 481 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 KYNUQ16719 465 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 HENMT1Q5T8I9 393 aaKnown RBP16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 ALS2CLQ60I27 953 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 ZNF449Q6P9G9 518 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 FAM151BQ6UXP7 276 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 C3orf62Q6ZUJ4 267 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 CYS1Q717R9 158 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 LMNTD2Q8IXW0 634 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 TRAM1L1Q8N609 369 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 CAVIN3Q969G5 261 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 SPATA16Q9BXB7 569 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 VPS37BQ9H9H4 285 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 LRRC4CQ9HCJ2 640 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 ARGLU1Q9NWB6 273 aaPredicted RBP16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 NINJ2Q9NZG7 142 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 CD84Q9UIB8 345 aa16.42■□□□□ 0.22
TSPAN4-208ENST00000409531 GOLGA8CPA6NN73 597 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 SLC31A1O15431 190 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 SRP72O76094 671 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 PRAMEF1O95521 474 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 TEAD1P28347 426 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 MC4RP32245 332 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 STX2P32856 288 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 ARSDP51689 593 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 CACNG1Q06432 222 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 GRIK2Q13002 908 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 THOC5Q13769 683 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 FGL2Q14314 439 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 GPR33Q49SQ1 333 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 AARS2Q5JTZ9 985 aaKnown RBP16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 IL27RAQ6UWB1 636 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 SNX20Q7Z614 316 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 MINDY1Q8N5J2 469 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 OR4L1Q8NH43 312 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 KLK6Q92876 244 aa16.41■□□□□ 0.22
TSPAN4-208ENST00000409531 SCAMP4Q969E2 229 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms