RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 MYLK3Q32MK0 819 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 CERS6Q6ZMG9 384 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 GRASPQ7Z6J2 395 aaPredicted RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 ISG20Q96AZ6 181 aaKnown RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 SLC30A3Q99726 388 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 MTIF3Q9H2K0 278 aaKnown RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 LINC00597Q9H2U6 94 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 SARS2Q9NP81 518 aaKnown RBP20.58■□□□□ 0.88
USP39-203ENST00000409470 SPHK2Q9NRA0 654 aa20.58■□□□□ 0.88
USP39-203ENST00000409470 CAPN8A6NHC0 703 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 A8MX80 341 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 PEX11AO75192 247 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 PABPC1P11940 636 aaKnown RBP20.57■□□□□ 0.88
USP39-203ENST00000409470 COX4I1P13073 169 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 PPARGP37231 505 aaPredicted RBP20.57■□□□□ 0.88
USP39-203ENST00000409470 ADARP55265 1226 aaKnown RBP20.57■□□□□ 0.88
USP39-203ENST00000409470 SLC25A3Q00325 362 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 CAMK1Q14012 370 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 TSNQ15631 228 aaKnown RBP20.57■□□□□ 0.88
USP39-203ENST00000409470 SCUBE1Q8IWY4 988 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 KCNJ9Q92806 393 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 CATSPER2Q96P56 530 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 TNFRSF12AQ9NP84 129 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 TBC1D14Q9P2M4 693 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 MYO7AQ13402 2215 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 PDE4DIPQ5VU43 2346 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 GBF1Q92538 1859 aa20.57■□□□□ 0.88
USP39-203ENST00000409470 BTN3A1O00481 513 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 PER2O15055 1255 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 TM7SF2O76062 418 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 MTHFD2P13995 350 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 TYRP14679 529 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 MYOGP15173 224 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 CD9P21926 228 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 CPOXP36551 454 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 RAP1GDS1P52306 607 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 IL2P60568 153 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 BTKQ06187 659 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 KPNB1Q14974 876 aaKnown RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 ZNF77Q15935 545 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 TMEM198Q66K66 360 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ZSWIM9Q86XI8 627 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 KIRREL3Q8IZU9 778 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 TTC1Q99614 292 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ASB8Q9H765 288 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 RNPEPL1Q9HAU8 725 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 APPL1Q9UKG1 709 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 TRAF6Q9Y4K3 522 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ALPK3Q96L96 1907 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 NPEPPSL1A6NEC2 478 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 SYCE1LA8MT33 242 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 CDC7O00311 574 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 SDHDO14521 159 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 UBFD1O14562 309 aaKnown RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 PRMT5O14744 637 aaPredicted RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 SIX3O95343 332 aaPredicted RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 ITGALP20701 1170 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 PIK3R1P27986 724 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 CDH13P55290 713 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ECT2LQ008S8 904 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 CUL3Q13618 768 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 LY6G5CQ5SRR4 150 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 UGT3A1Q6NUS8 523 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 SERPINA9Q86WD7 417 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ULK2Q8IYT8 1036 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 FBXO39Q8N4B4 442 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ZNF557Q8N988 423 aaPredicted RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 CD200R1Q8TD46 325 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ING5Q8WYH8 240 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 LINGO1Q96FE5 620 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 MAELQ96JY0 434 aaKnown RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 ZSWIM3Q96MP5 696 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 LENG8Q96PV6 779 aaPredicted RBP20.56■□□□□ 0.88
USP39-203ENST00000409470 TUBGCP5Q96RT8 1024 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 P2RY12Q9H244 342 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 ZDHHC6Q9H6R6 413 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 IKZF3Q9UKT9 509 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 PCDHB1Q9Y5F3 818 aa20.56■□□□□ 0.88
USP39-203ENST00000409470 GOLGA8CPA6NN73 597 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 SOBPA7XYQ1 873 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 C5orf67F2Z3F1 127 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CIB2O75838 187 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 ARHGEF15O94989 841 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CCNHP51946 323 aaPredicted RBP20.55■□□□□ 0.88
USP39-203ENST00000409470 SATB1Q01826 763 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CDKN3Q16667 212 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CARD16Q5EG05 197 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 PRSS36Q5K4E3 855 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 ELMSAN1Q6PJG2 1045 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 SNX20Q7Z614 316 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CPSF7Q8N684 471 aaKnown RBP20.55■□□□□ 0.88
USP39-203ENST00000409470 PCDH20Q8N6Y1 951 aaKnown RBP20.55■□□□□ 0.88
USP39-203ENST00000409470 CEP70Q8NHQ1 597 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 GIMAP7Q8NHV1 300 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CLPTM1LQ96KA5 538 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 MARK4Q96L34 752 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CEP44Q9C0F1 390 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 CLPBQ9H078 707 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 SUV39H2Q9H5I1 410 aa20.55■□□□□ 0.88
USP39-203ENST00000409470 WNT6Q9Y6F9 365 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms