RNA–Protein interactions for RNA: ENST00000407019.6

NUP50-203, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 2,059 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-203ENST00000407019 MUC3BQ9H195 1237 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 HMX1Q9NP08 348 aaPredicted RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 SEMA4BQ9NPR2 832 aaPredicted RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 GKN1Q9NS71 199 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TRPM5Q9NZQ8 1165 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 POLG2Q9UHN1 485 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 BTRCQ9Y297 605 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TBC1D30Q9Y2I9 924 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 NDUFAF1Q9Y375 327 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TCRBV3S1A0A5B6 114 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 CDC7O00311 574 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 BTN3A1O00481 513 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 STX16O14662 325 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 AOC2O75106 756 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 VPS4BO75351 444 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 STAMBPO95630 424 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TTPAP49638 278 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 NME5P56597 212 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 NAA20P61599 178 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 USP41Q3LFD5 358 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 C6orf10Q5SRN2 563 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 ADGRF1Q5T601 910 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 PSAPL1Q6NUJ1 521 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 RETREG3Q86VR2 466 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 FAM126BQ8IXS8 530 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 EFHBQ8N7U6 833 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 DUS3LQ96G46 650 aaKnown RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 BIRC8Q96P09 236 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 SLC39A3Q9BRY0 314 aa16.74■□□□□ 0.27
NUP50-203ENST00000407019 TRMT6Q9UJA5 497 aaKnown RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 CNOT11Q9UKZ1 510 aaKnown RBP16.74■□□□□ 0.27
NUP50-203ENST00000407019 ANKRD66B4E2M5 251 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 MATN4O95460 622 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 LINC00032P0C843 101 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 HSPA8P11142 646 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 HGFP14210 728 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 HMGA1P17096 107 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 ARF5P84085 180 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 NOGQ13253 232 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 CXorf57Q6NSI4 855 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 PRMT9Q6P2P2 845 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 TXNDC11Q6PKC3 985 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 PIANPQ8IYJ0 282 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 GALNT4Q8N4A0 578 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 PBXIP1Q96AQ6 731 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 GALPQ9UBC7 116 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 BACE2Q9Y5Z0 518 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 HTTP42858 3142 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 ANGPT2O15123 496 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 STX7O15400 261 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 KLK8O60259 260 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 TMCC1O94876 653 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 SLC7A1P30825 629 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 TRAF2Q12933 501 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 RPS6KA2Q15349 733 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 ZRANB3Q5FWF4 1079 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 CTSL3PQ5NE16 218 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 SLC30A9Q6PML9 568 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 DHFR2Q86XF0 187 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 SIDT2Q8NBJ9 832 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 EME1Q96AY2 570 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 SLC30A3Q99726 388 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 HOPXQ9BPY8 73 aaPredicted RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 GPATCH1Q9BRR8 931 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 C1QTNF3Q9BXJ4 246 aa16.73■□□□□ 0.27
NUP50-203ENST00000407019 SDR39U1Q9NRG7 319 aaPredicted RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 PAPOLBQ9NRJ5 636 aaKnown RBP16.73■□□□□ 0.27
NUP50-203ENST00000407019 A0A1B0GTL3 188 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 NIPSNAP2O75323 286 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 SEC24AO95486 1093 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 IDO1P14902 403 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 CAPN3P20807 821 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 CD9P21926 228 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 GRIA2P42262 883 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 VPS26BQ4G0F5 336 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 FBXO48Q5FWF7 155 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 CYP2R1Q6VVX0 501 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 EFL1Q7Z2Z2 1120 aaKnown RBP16.72■□□□□ 0.27
NUP50-203ENST00000407019 HERC6Q8IVU3 1022 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 ZNF483Q8TF39 744 aaPredicted RBP16.72■□□□□ 0.27
NUP50-203ENST00000407019 SLCO4A1Q96BD0 722 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 CNBD2Q96M20 576 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 CYP2S1Q96SQ9 504 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 EFHD1Q9BUP0 239 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 NUSAP1Q9BXS6 441 aaKnown RBP16.72■□□□□ 0.27
NUP50-203ENST00000407019 BPIFA1Q9NP55 256 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 UBAP1Q9NZ09 502 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 MAP10Q9P2G4 905 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 AFF4Q9UHB7 1163 aaKnown RBP16.72■□□□□ 0.27
NUP50-203ENST00000407019 TMCO1Q9UM00 188 aa16.72■□□□□ 0.27
NUP50-203ENST00000407019 NCF1BA6NI72 391 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 NCF1CA8MVU1 366 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 PITPNM1O00562 1244 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 OR1I1O60431 355 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 MLYCDO95822 493 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 EFEMP2O95967 443 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 SMIM18P0DKX4 95 aa16.71■□□□□ 0.27
NUP50-203ENST00000407019 NCF1P14598 390 aaPredicted RBP16.71■□□□□ 0.27
NUP50-203ENST00000407019 ALDH7A1P49419 539 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms