RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 GALNT7Q86SF2 657 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 ZC3HC1Q86WB0 502 aaKnown RBP20.35■□□□□ 0.85
CHKB-201ENST00000406938 CYP4X1Q8N118 509 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 GOLGA6L1Q8N7Z2 621 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 DTX3LQ8TDB6 740 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 SGK2Q9HBY8 427 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 TMBIM4Q9HC24 238 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 CRLS1Q9UJA2 301 aa20.35■□□□□ 0.85
CHKB-201ENST00000406938 LRRK1Q38SD2 2015 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 AGAP14A8MT82 685 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 RGS16O15492 202 aaPredicted RBP20.34■□□□□ 0.85
CHKB-201ENST00000406938 HAUS5O94927 633 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 S1PR4O95977 384 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 CD151P48509 253 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 TTPAP49638 278 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 SERPINB9P50453 376 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 LIMK2P53671 638 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 GPR33Q49SQ1 333 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 NEK5Q6P3R8 708 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 TAOK1Q7L7X3 1001 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 SERPINA9Q86WD7 417 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 HORMAD1Q86X24 394 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 CAMKK1Q8N5S9 505 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 OR2T34Q8NGX1 318 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 PGM2Q96G03 612 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 TCF12Q99081 682 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 RHOJQ9H4E5 214 aa20.34■□□□□ 0.85
CHKB-201ENST00000406938 INTS10Q9NVR2 710 aaKnown RBP20.34■□□□□ 0.85
CHKB-201ENST00000406938 LRRC72A6NJI9 287 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 FADS2P1A8MWK0 482 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 K7ESF4 209 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 ZNF217O75362 1048 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 SYF2O95926 243 aaKnown RBP20.33■□□□□ 0.84
CHKB-201ENST00000406938 ACRV1P26436 265 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 FGL2Q14314 439 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 DBN1Q16643 649 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 SETMARQ53H47 684 aaPredicted RBP20.33■□□□□ 0.84
CHKB-201ENST00000406938 RNF187Q5TA31 235 aaPredicted RBP20.33■□□□□ 0.84
CHKB-201ENST00000406938 CNSTQ6PJW8 725 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 CERS6Q6ZMG9 384 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 PELI3Q8N2H9 469 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 NXPE1Q8N323 547 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 SCG3Q8WXD2 468 aaKnown RBP20.33■□□□□ 0.84
CHKB-201ENST00000406938 KLK6Q92876 244 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 ARL8AQ96BM9 186 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 VPS39Q96JC1 886 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 C1QTNF2Q9BXJ5 285 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 SMOXQ9NWM0 555 aa20.33■□□□□ 0.84
CHKB-201ENST00000406938 IQANK1A0A1B0GTG1 560 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 HMX2A2RU54 273 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 K7ESM1 405 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 KRT37O76014 449 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 KRT38O76015 456 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 SEMA4FO95754 770 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 SOD1P00441 154 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 ITGA2BP08514 1039 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 CNTFP26441 200 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 MAT2AP31153 395 aaKnown RBP20.32■□□□□ 0.84
CHKB-201ENST00000406938 SPRP35270 261 aaPredicted RBP20.32■□□□□ 0.84
CHKB-201ENST00000406938 DPTQ07507 201 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 AGERQ15109 404 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 MAP7D1Q3KQU3 841 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 MROH9Q5TGP6 573 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 MAMSTRQ6ZN01 415 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 RLN3Q8WXF3 142 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 LPGAT1Q92604 370 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 ULK4Q96C45 1275 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 TOE1Q96GM8 510 aaKnown RBP20.32■□□□□ 0.84
CHKB-201ENST00000406938 SPATA6Q9NWH7 488 aaPredicted RBP20.32■□□□□ 0.84
CHKB-201ENST00000406938 TMPRSS11EQ9UL52 423 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 BDP1A6H8Y1 2624 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 NUMA1Q14980 2115 aa20.32■□□□□ 0.84
CHKB-201ENST00000406938 FOXO6A8MYZ6 492 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 OR1I1O60431 355 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 NDUFS3O75489 264 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 CD6P30203 668 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 OXTRP30559 389 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 SGCGQ13326 291 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 WSCD2Q2TBF2 565 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 TTMPQ5BVD1 217 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 RAET1GQ6H3X3 334 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 TRIM69Q86WT6 500 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 MZB1Q8WU39 189 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 CCDC97Q96F63 343 aaPredicted RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 SLC17A9Q9BYT1 436 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 KCTD5Q9NXV2 234 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 VPS9D1Q9Y2B5 631 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 CRYL1Q9Y2S2 319 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 IGHV1OR15-9A0A0B4J2B8 117 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 UBA6A0AVT1 1052 aaPredicted RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 TRIM49D1C9J1S8 452 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 PFDN6O15212 129 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 PAK4O96013 591 aaPredicted RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 SNRPAP09012 282 aaKnown RBP20.31■□□□□ 0.84
CHKB-201ENST00000406938 KRT15P19012 456 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 CLCN5P51795 746 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 GPS2Q13227 327 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 LGSNQ5TDP6 509 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 LYPLAL1Q5VWZ2 237 aa20.31■□□□□ 0.84
CHKB-201ENST00000406938 FAM160A2Q8N612 972 aaPredicted RBP20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms