RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 FAM83DQ9H4H8 585 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 GPAMQ9HCL2 828 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 TRPV5Q9NQA5 729 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 CPSF2Q9P2I0 782 aaKnown RBP3.69□□□□□ -1.82
RTN4-208ENST00000404909 TSR3Q9UJK0 312 aaKnown RBP3.69□□□□□ -1.82
RTN4-208ENST00000404909 FBXL21Q9UKT6 434 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 GRID1Q9ULK0 1009 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 ACOT9Q9Y305 439 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 PLLPQ9Y342 182 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 ZDBF2Q9HCK1 2354 aa3.69□□□□□ -1.82
RTN4-208ENST00000404909 COL4A3Q01955 1670 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TSPAN11A1L157 253 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 E5RI56 91 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 STK25O00506 426 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NPC1O15118 1278 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TM9SF1O15321 606 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ASMTLO95671 621 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MPOP05164 745 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SLC35E2BP0CK96 405 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CRABP2P29373 138 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AKT1P31749 480 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PPARGP37231 505 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 CCNFP41002 786 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ELP6Q0PNE2 266 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RALGDSQ12967 914 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PDAP1Q13442 181 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 CAMK2GQ13555 558 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 CSHL1Q14406 222 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TERF2Q15554 542 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZKSCAN8Q15776 578 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 DBN1Q16643 649 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZNF284Q2VY69 593 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RNF187Q5TA31 235 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 PTRHD1Q6GMV3 140 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 GPR153Q6NV75 609 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 LIPIQ6XZB0 460 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DET1Q7L5Y6 550 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TBC1D1Q86TI0 1168 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM124AQ86V42 546 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AADATQ8N5Z0 425 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 OR2T3Q8NH03 318 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 HCAR2Q8TDS4 363 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CXorf40AQ8TE69 158 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DENND1AQ8TEH3 1009 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KCTD4Q8WVF5 259 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 AP2M1Q96CW1 435 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TSPAN17Q96FV3 270 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TCF12Q99081 682 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 MECRQ9BV79 373 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CLPBQ9H078 707 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RSPH9Q9H1X1 276 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 SSU72Q9NP77 194 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 INTS10Q9NVR2 710 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 FBXL12Q9NXK8 326 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TMEM216Q9P0N5 145 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SERGEFQ9UGK8 458 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DCDC2Q9UHG0 476 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RUVBL2Q9Y230 463 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 VPS9D1Q9Y2B5 631 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 A0A1W2PQF6 199 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 TCP11X1B4DZS4 312 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PRMT5O14744 637 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 WNT9AO14904 365 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 INPP4BO15327 924 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SPINT1O43278 529 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 GLRA3O75311 464 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NIPSNAP2O75323 286 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 RECQL5O94762 991 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 TRIM16O95361 564 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DNTTP04053 509 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CCDC166P0CW27 439 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 C6P13671 934 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZNF7P17097 686 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 COL9A1P20849 921 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KCNA4P22459 653 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ACRV1P26436 265 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 DRD3P35462 400 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PTGER3P43115 390 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SERPINB4P48594 390 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 UBXN2BQ14CS0 331 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 E2F5Q15329 346 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SETMARQ53H47 684 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZNF776Q68DI1 518 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM45BPQ6NSW5 357 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 KIAA1324Q6UXG2 1013 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 CERS6Q6ZMG9 384 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 ZNF852Q6ZMS4 543 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 Q6ZS52 159 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM47EQ6ZV65 393 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 NXPE1Q8N323 547 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CBARPQ8N350 705 aaPredicted RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 OR14C36Q8NHC7 312 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 FAM45AQ8TCE6 357 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 LRRC8CQ8TDW0 803 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SCG3Q8WXD2 468 aaKnown RBP3.68□□□□□ -1.82
RTN4-208ENST00000404909 NXNL1Q96CM4 212 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 SGF29Q96ES7 293 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 CABS1Q96KC9 395 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 BIRC8Q96P09 236 aa3.68□□□□□ -1.82
RTN4-208ENST00000404909 PLEKHG4BQ96PX9 1271 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms