RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 DTX3LQ8TDB6 740 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 CDC42EP4Q9H3Q1 356 aaKnown RBP33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 C20orf96Q9NUD7 363 aaPredicted RBP33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 OR1A2Q9Y585 309 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 ATXN2Q99700 1313 aaKnown RBP33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 FRYLO94915 3013 aa33.07■■■□□ 2.88
CSNK1E-204ENST00000403904 CTIFO43310 598 aaKnown RBP33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 CDKN1CP49918 316 aaPredicted RBP33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 GPX6P59796 221 aa33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 ITGA9Q13797 1035 aa33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 SNX20Q7Z614 316 aa33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 NINJ2Q9NZG7 142 aa33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 PLXNB3Q9ULL4 1909 aa33.06■■■□□ 2.88
CSNK1E-204ENST00000403904 INPP4BO15327 924 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 TUBBP07437 444 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 ITGALP20701 1170 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 TRIM23P36406 574 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 UBAP2Q5T6F2 1119 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 TRMT10BQ6PF06 316 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 C3orf62Q6ZUJ4 267 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 HEATR4Q86WZ0 1026 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 GSDMBQ8TAX9 411 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 SEMA4AQ9H3S1 761 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 TM9SF3Q9HD45 589 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 TMPRSS11EQ9UL52 423 aa33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 CNOT6Q9ULM6 557 aaKnown RBP33.05■■■□□ 2.88
CSNK1E-204ENST00000403904 PYGLP06737 847 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 FOXN2P32314 431 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 RACK1P63244 317 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 CACNG1Q06432 222 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 PDPK2PQ6A1A2 396 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 PSAPL1Q6NUJ1 521 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 ADAMTSL4Q6UY14 1074 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 ABI3BPQ7Z7G0 1075 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 PIANPQ8IYJ0 282 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 PNPLA1Q8N8W4 532 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 TMEM74BQ9NUR3 256 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 LAMA1P25391 3075 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 ERVK-10P10266 1014 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 CERS2Q96G23 380 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 SGSM3Q96HU1 749 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 APOOQ9BUR5 198 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 LGR4Q9BXB1 951 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 TXLNGYQ9BZA5 131 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 WDR26Q9H7D7 661 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 VPS37BQ9H9H4 285 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 PPANQ9NQ55 473 aaKnown RBP33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 CATSPERZQ9NTU4 200 aa33.04■■■□□ 2.88
CSNK1E-204ENST00000403904 CD3EAPO15446 510 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 TEAD1P28347 426 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 PFN3P60673 137 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 FASTKD1Q53R41 847 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 HSP90AA5PQ58FG0 334 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 KYAT3Q6YP21 454 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 TAS2R42Q7RTR8 314 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 KCNMB4Q86W47 210 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 BTN2A2Q8WVV5 523 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 GLYATL1Q969I3 302 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 FUBP1Q96AE4 644 aaKnown RBP33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 VPS35Q96QK1 796 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 TEX101Q9BY14 249 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 ARFGAP3Q9NP61 516 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 MARCH4Q9P2E8 410 aaPredicted RBP33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 CRLS1Q9UJA2 301 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 PILRBQ9UKJ0 227 aa33.03■■■□□ 2.88
CSNK1E-204ENST00000403904 A6NNZ2 444 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 AGAP14A8MT82 685 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 BCAT2O15382 392 aaPredicted RBP33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 CDK3Q00526 305 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 GPR33Q49SQ1 333 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 NEPROQ6NW34 567 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 LAYNQ6UX15 382 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 Q6ZSR6 202 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 TRIM74Q86UV6 250 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 OTUD6BQ8N6M0 293 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 OR13H1Q8NG92 308 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 AENQ8WTP8 325 aaKnown RBP33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 PIGKQ92643 395 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 HIC2Q96JB3 615 aa33.02■■■□□ 2.88
CSNK1E-204ENST00000403904 SLC25A14O95258 325 aaPredicted RBP33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 ACSL3O95573 720 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 CD38P28907 300 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 PMS2P54278 862 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 THOC5Q13769 683 aaKnown RBP33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 SEMA3AQ14563 771 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 ATOH1Q92858 354 aaPredicted RBP33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 TTC25Q96NG3 672 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 MOCS1Q9NZB8 636 aa33.01■■■□□ 2.88
CSNK1E-204ENST00000403904 TRBV5-4A0A0C4DH59 114 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 A0A1W2PR77 199 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 WNT1P04628 370 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 GSTA2P09210 222 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 LDB1Q86U70 411 aaPredicted RBP33■■■□□ 2.87
CSNK1E-204ENST00000403904 GDAP1Q8TB36 358 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 PHPT1Q9NRX4 125 aaPredicted RBP33■■■□□ 2.87
CSNK1E-204ENST00000403904 SMOXQ9NWM0 555 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 TCRBV9S1A1TA0A576 114 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 THEGLP0DJG4 465 aa33■■■□□ 2.87
CSNK1E-204ENST00000403904 FRG1Q14331 258 aaKnown RBP33■■■□□ 2.87
CSNK1E-204ENST00000403904 GPRC6AQ5T6X5 926 aa33■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms