RNA–Protein interactions for RNA: ENST00000399306.6

CTNS-203, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3 BASIC

Gene CTNS, Length 803 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-203ENST00000399306 PHYKPLQ8IUZ5 450 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 FSTL5Q8N475 847 aaPredicted RBP17.54■□□□□ 0.4
CTNS-203ENST00000399306 PPHLN1Q8NEY8 458 aaKnown RBP17.54■□□□□ 0.4
CTNS-203ENST00000399306 SAP25Q8TEE9 199 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 AGAP2Q99490 1192 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 RTKNQ9BST9 563 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 LGR4Q9BXB1 951 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 IL21RQ9HBE5 538 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 SPASTQ9UBP0 616 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 TCAF1Q9Y4C2 921 aa17.54■□□□□ 0.4
CTNS-203ENST00000399306 CFAP54Q96N23 3096 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TCRBV7S3A2A0A539 114 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 NEMP2A6NFY4 417 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TMEM202A6NGA9 273 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 GOLGA8CPA6NN73 597 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TM4SF5O14894 197 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 VEGFDO43915 354 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TMEM63AO94886 807 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TNFP01375 233 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 CEACAM5P06731 702 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 CD59P13987 128 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 JUNDP17535 347 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 SRP54P61011 504 aaKnown RBP17.53■□□□□ 0.4
CTNS-203ENST00000399306 XIAPP98170 497 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 ALG11Q2TAA5 492 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TSTD2Q5T7W7 516 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 ALS2CLQ60I27 953 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 CAND1Q86VP6 1230 aaKnown RBP17.53■□□□□ 0.4
CTNS-203ENST00000399306 PHACTR4Q8IZ21 702 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 SNF8Q96H20 258 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 SERPINB12Q96P63 405 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 KIFC1Q9BW19 673 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 SLC13A1Q9BZW2 595 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TRIM39Q9HCM9 518 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 TRNAU1APQ9NX07 287 aaKnown RBP17.53■□□□□ 0.4
CTNS-203ENST00000399306 DNAJC28Q9NX36 388 aa17.53■□□□□ 0.4
CTNS-203ENST00000399306 CDV3Q9UKY7 258 aaKnown RBP17.53■□□□□ 0.4
CTNS-203ENST00000399306 COL5A1P20908 1838 aaPredicted RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 DMXL1Q9Y485 3027 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 PRSS38A1L453 326 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 TPP1O14773 563 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ZNF500O60304 480 aaPredicted RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 SRP72O76094 671 aaKnown RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 SLC25A14O95258 325 aaPredicted RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 CSRP1P21291 193 aaKnown RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 DGKAP23743 735 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 GRK6P43250 576 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 NFATC2Q13469 925 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 SEPT6Q14141 434 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ATP13A5Q4VNC0 1218 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 LDLRAP1Q5SW96 308 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ANKRD22Q5VYY1 191 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 LVRNQ6Q4G3 990 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 KDM7AQ6ZMT4 941 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 SNX20Q7Z614 316 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 PIP4P1Q86T03 277 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 DDHD1Q8NEL9 900 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 OR13C4Q8NGS5 318 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ZNF398Q8TD17 642 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 HEXDCQ8WVB3 486 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ULK4Q96C45 1275 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 CDKN2AIPNLQ96HQ2 116 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 DNAJC1Q96KC8 554 aaKnown RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 ERP44Q9BS26 406 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 ZCCHC2Q9C0B9 1178 aaKnown RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 RAB17Q9H0T7 212 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 FGF22Q9HCT0 170 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 DLL3Q9NYJ7 618 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 APOBEC3BQ9UH17 382 aaKnown RBP17.52■□□□□ 0.4
CTNS-203ENST00000399306 KCTD3Q9Y597 815 aa17.52■□□□□ 0.4
CTNS-203ENST00000399306 PLXNB3Q9ULL4 1909 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 CNOT1A5YKK6 2376 aaKnown RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 TRBV5-4A0A0C4DH59 114 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 SDR42E2A6NKP2 422 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 EFCAB8A8MWE9 144 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 SCAMP1O15126 338 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 BUD23O43709 281 aaKnown RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 SEC31AO94979 1220 aaKnown RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 PRAMEF1O95521 474 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 ITGALP20701 1170 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 DRG2P55039 364 aaKnown RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 SESN2P58004 480 aaPredicted RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 C2orf54Q08AI8 447 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 PEX6Q13608 980 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 CHRNA6Q15825 494 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 IZUMO3Q5VZ72 239 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 HIBCHQ6NVY1 386 aaPredicted RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 FAM151BQ6UXP7 276 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 MMGT1Q8N4V1 131 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 CEP112Q8N8E3 955 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 OR13J1Q8NGT2 312 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 OR2I1PQ8NGU4 316 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 OR1E3Q8WZA6 343 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 DUSP23Q9BVJ7 150 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 PIH1D1Q9NWS0 290 aaKnown RBP17.51■□□□□ 0.39
CTNS-203ENST00000399306 WHRNQ9P202 907 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 KLF15Q9UIH9 416 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 FKBPLQ9UIM3 349 aa17.51■□□□□ 0.39
CTNS-203ENST00000399306 SOX13Q9UN79 622 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms