RNA–Protein interactions for RNA: ENST00000399082.7

HLA-DQB1-203, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-203ENST00000399082 FASTKD3Q14CZ7 662 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SHBQ15464 509 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KHDC1Q4VXA5 237 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GLE1Q53GS7 698 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RABEPKQ7Z6M1 372 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PNPLA1Q8N8W4 532 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PPHLN1Q8NEY8 458 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RUBCNQ92622 972 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MFSD3Q96ES6 412 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KLHDC7BQ96G42 594 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CDKN2AIPNLQ96HQ2 116 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TBATAQ96M53 351 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SPATA16Q9BXB7 569 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 WDR26Q9H7D7 661 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A7Q9HAW7 530 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A10Q9HAW8 530 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UGT1A8Q9HAW9 530 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MRM3Q9HC36 420 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RAD18Q9NS91 495 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NCDNQ9UBB6 729 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KLF15Q9UIH9 416 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SLC6A14Q9UN76 642 aa12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 UTP11Q9Y3A2 253 aaKnown RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PCYT1BQ9Y5K3 369 aaPredicted RBP12.33□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TRBV5-4A0A0C4DH59 114 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SPTY2D1-AS1A0A0U1RR47 76 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZCWPW2A0A1B0GU75 182 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CCDC162PA2VCL2 907 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SDR42E2A6NKP2 422 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 E7ESA3 106 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SMAPO00193 183 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 INPP4BO15327 924 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SRP72O76094 671 aaKnown RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PRAMEF1O95521 474 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HOXC4P09017 264 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MYCLP1P12525 358 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ENGP17813 658 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FOXN2P32314 431 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CDKN1CP49918 316 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 YPEL5P62699 121 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDE1BQ01064 536 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDE1CQ14123 709 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CSRP2Q16527 193 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 BBS9Q3SYG4 887 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PRAMEF14Q5SWL7 426 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF648Q5T619 568 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MACC1Q6ZN28 852 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TMEM135Q86UB9 458 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PIANPQ8IYJ0 282 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 BBOF1Q8ND07 529 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM174AQ8TBP5 190 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 OR1E3Q8WZA6 343 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PEX13Q92968 403 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HDAC10Q969S8 669 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 VPS35Q96QK1 796 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZSCAN5AQ9BUG6 496 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FRMD8Q9BZ67 464 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 IL21RQ9HBE5 538 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 EPB41L5Q9HCM4 733 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FGF22Q9HCT0 170 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ARFGAP3Q9NP61 516 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RRAGDQ9NQL2 400 aaPredicted RBP12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SMOXQ9NWM0 555 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TEX264Q9Y6I9 313 aa12.32□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GVINP1Q7Z2Y8 2422 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 RIF1Q5UIP0 2472 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ARHGAP33O14559 1287 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 KHNYNO15037 678 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MTX2O75431 263 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GOT2P00505 430 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CEACAM5P06731 702 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 MC4RP32245 332 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HADHAP40939 763 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ARCN1P48444 511 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PLTPP55058 493 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 CALCOCO2Q13137 446 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NFATC2Q13469 925 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SEMA3AQ14563 771 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TEAD4Q15561 434 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HIF1AQ16665 826 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 SKIDA1Q1XH10 827 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF423Q2M1K9 1284 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ALG11Q2TAA5 492 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ANKRD20A4Q4UJ75 823 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZNF542PQ5EBM4 170 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 HP1BP3Q5SSJ5 553 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ARMC3Q5W041 872 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 ZDHHC20Q5W0Z9 365 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDPK2PQ6A1A2 396 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PSAPL1Q6NUJ1 521 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PRR23CQ6ZRP0 262 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 BTN2A2Q8WVV5 523 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 GLYATL1Q969I3 302 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 STAMBPL1Q96FJ0 436 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 PDXPQ96GD0 296 aa12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 EBNA1BP2Q99848 306 aaKnown RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 TCEAL2Q9H3H9 227 aaPredicted RBP12.31□□□□□ -0.44
HLA-DQB1-203ENST00000399082 FAM96AQ9H5X1 160 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms