RNA–Protein interactions for RNA: ENST00000398137.5

U2AF1-203, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-203ENST00000398137 SPINT3P49223 89 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 CDK16Q00536 496 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 POU6F1Q14863 301 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 ZNF542PQ5EBM4 170 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 RNASEH2BQ5TBB1 312 aaKnown RBP25.3■■□□□ 1.64
U2AF1-203ENST00000398137 IZUMO3Q5VZ72 239 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 MAATS1Q7Z4T9 603 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 PTAR1Q7Z6K3 402 aaPredicted RBP25.3■■□□□ 1.64
U2AF1-203ENST00000398137 CTAGE6Q86UF2 777 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 CTAGE4Q8IX94 777 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 PPIL6Q8IXY8 311 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 PLA2G15Q8NCC3 412 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 BPIFA1Q9NP55 256 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP25.3■■□□□ 1.64
U2AF1-203ENST00000398137 KLF15Q9UIH9 416 aa25.3■■□□□ 1.64
U2AF1-203ENST00000398137 KNTC1P50748 2209 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 TRABD2BA6NFA1 517 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 GOLGA8MH3BSY2 632 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 CKMT2P17540 419 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 IVDP26440 423 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 MTM1Q13496 603 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 TAF1AQ15573 450 aaPredicted RBP25.29■■□□□ 1.64
U2AF1-203ENST00000398137 CERCAMQ5T4B2 595 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 ALS2CLQ60I27 953 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 ZNF534Q76KX8 674 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 PELI3Q8N2H9 469 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 BRSK1Q8TDC3 778 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 SCAMP4Q969E2 229 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 ABCG8Q9H221 673 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 CCDC86Q9H6F5 360 aaKnown RBP25.29■■□□□ 1.64
U2AF1-203ENST00000398137 KCTD3Q9Y597 815 aa25.29■■□□□ 1.64
U2AF1-203ENST00000398137 APC2O95996 2303 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 SCN8AQ9UQD0 1980 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 SPTY2D1-AS1A0A0U1RR47 76 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 EFCAB8A8MWE9 144 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 K7ESM1 405 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 HMGCLP35914 325 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 SESN2P58004 480 aaPredicted RBP25.28■■□□□ 1.64
U2AF1-203ENST00000398137 PFN3P60673 137 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 C8orf74Q6P047 294 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 TMPRSS12Q86WS5 348 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 NRSN1Q8IZ57 195 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 NAT8LQ8N9F0 302 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 OR4C6Q8NH72 309 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 FAM174AQ8TBP5 190 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 AP2M1Q96CW1 435 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 RIOK2Q9BVS4 552 aaKnown RBP25.28■■□□□ 1.64
U2AF1-203ENST00000398137 CARD6Q9BX69 1037 aa25.28■■□□□ 1.64
U2AF1-203ENST00000398137 PNMA8BQ9ULN7 279 aaPredicted RBP25.28■■□□□ 1.64
U2AF1-203ENST00000398137 C2orf81A6NN90 581 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 CRTAMO95727 393 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 BPIP17213 487 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 ACP1P24666 158 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 ZNF140P52738 457 aaPredicted RBP25.27■■□□□ 1.64
U2AF1-203ENST00000398137 PTPRCAPQ14761 206 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 CCDC38Q502W7 563 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 RAET1GQ6H3X3 334 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 ESRP1Q6NXG1 681 aaKnown RBP25.27■■□□□ 1.64
U2AF1-203ENST00000398137 LRRC8BQ6P9F7 803 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 ZNF765Q7L2R6 523 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 CEP112Q8N8E3 955 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 NOA1Q8NC60 698 aaKnown RBP25.27■■□□□ 1.64
U2AF1-203ENST00000398137 GPR26Q8NDV2 337 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 SNF8Q96H20 258 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 KCTD5Q9NXV2 234 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 IL17CQ9P0M4 197 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 DKK4Q9UBT3 224 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 PKP3Q9Y446 797 aa25.27■■□□□ 1.64
U2AF1-203ENST00000398137 DSPP15924 2871 aaKnown RBP25.27■■□□□ 1.64
U2AF1-203ENST00000398137 LY6G6EA0A0G2JKS1 128 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 CCDC78A2IDD5 438 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 RGSL1A5PLK6 1076 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 STX7O15400 261 aaKnown RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 FFAR2O15552 330 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 LDB2O43679 373 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 LPOP22079 712 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 RPL21P46778 160 aaKnown RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 SARNPP82979 210 aaKnown RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 INPP5AQ14642 412 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 DCP2Q8IU60 420 aaKnown RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 RAVER1Q8IY67 606 aaKnown RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 MCUQ8NE86 351 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 ERP44Q9BS26 406 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 DPH5Q9H2P9 285 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 FAM83DQ9H4H8 585 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 RAD18Q9NS91 495 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 DNAJC28Q9NX36 388 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 SNX24Q9Y343 169 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 OR1A2Q9Y585 309 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 U3KQA8 63 aa25.26■■□□□ 1.63
U2AF1-203ENST00000398137 ANKRD11Q6UB99 2663 aaPredicted RBP25.26■■□□□ 1.63
U2AF1-203ENST00000398137 SEC31AO94979 1220 aaKnown RBP25.25■■□□□ 1.63
U2AF1-203ENST00000398137 CSF2P04141 144 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 MYF5P13349 255 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 NME1P15531 152 aaKnown RBP25.25■■□□□ 1.63
U2AF1-203ENST00000398137 RABIFP47224 123 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 DCDC1P59894 354 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 CRADDP78560 199 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 DPTQ07507 201 aa25.25■■□□□ 1.63
U2AF1-203ENST00000398137 CYP4F3Q08477 520 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms