RNA–Protein interactions for RNA: ENST00000397378.7

NEDD9-203, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 3

Gene NEDD9, Length 470 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-203ENST00000397378 B4GALT6Q9UBX8 382 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 KLHL3Q9UH77 587 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 NOCTQ9UK39 431 aaKnown RBP9.35□□□□□ -0.91
NEDD9-203ENST00000397378 FZD10Q9ULW2 581 aa9.35□□□□□ -0.91
NEDD9-203ENST00000397378 A8MX80 341 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 F8VZ95 297 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 PSMD11O00231 422 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 HTRA2O43464 458 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 KIAA0754O94854 1291 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 HEXIM1O94992 359 aaKnown RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 CCNYL3P0C7X3 344 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 UCHL3P15374 230 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 VIPR1P32241 457 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 POLD2P49005 469 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 PAPOLAP51003 745 aaKnown RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 AP1S1P61966 158 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 FMO1Q01740 532 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 CDR2Q01850 454 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 DPTQ07507 201 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 PTP4A2Q12974 167 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 LRP8Q14114 963 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 MIIPQ5JXC2 388 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 TRIM72Q6ZMU5 477 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 RASGRP3Q8IV61 690 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 NXPE1Q8N323 547 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 PAF1Q8N7H5 531 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 FDCSPQ8NFU4 85 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SLC20A1Q8WUM9 679 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SEC14L1Q92503 715 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 NSMCE3Q96MG7 304 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 C11orf70Q9BRQ4 267 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 CINPQ9BW66 212 aaPredicted RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 STK33Q9BYT3 514 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SLC39A8Q9C0K1 460 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SARS2Q9NP81 518 aaKnown RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SIDT1Q9NXL6 827 aaKnown RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 LNPEPQ9UIQ6 1025 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 OSGIN2Q9Y236 505 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 PCDHGA6Q9Y5G7 932 aa9.34□□□□□ -0.91
NEDD9-203ENST00000397378 COPG1Q9Y678 874 aaKnown RBP9.34□□□□□ -0.91
NEDD9-203ENST00000397378 SEC16AO15027 2179 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 A6NL46 340 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SIGLEC16A6NMB1 481 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 F5H423 210 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 CCP110O43303 1012 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SOCS5O75159 536 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 NDUFA10O95299 355 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 MAP3K6O95382 1288 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 ANKRD34CP0C6C1 535 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 CYP2A6P11509 494 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 UNGP13051 313 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 CHRNB2P17787 502 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 HNRNPH3P31942 346 aaKnown RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 ETV3P41162 512 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 GARSP41250 739 aaKnown RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SCNN1BP51168 640 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 RENBPP51606 427 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 ZNF143P52747 638 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 EPHA4P54764 986 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 TPI1P60174 286 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 RPS18P62269 152 aaKnown RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 HHEXQ03014 270 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 UGT8Q16880 541 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 PLEKHN1Q494U1 663 aaPredicted RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 VWA3BQ502W6 1294 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 PYCR3Q53H96 274 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 RAET1GQ6H3X3 334 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SCYL2Q6P3W7 929 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 Q6ZVL8 140 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 HSD11B1LQ7Z5J1 315 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 FJX1Q86VR8 437 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 LZTR1Q8N653 840 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 C3orf20Q8ND61 904 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SLC30A5Q8TAD4 765 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 CT55Q8WUE5 264 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 NCSTNQ92542 709 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SH3KBP1Q96B97 665 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 CELF6Q96J87 481 aaKnown RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 ELMO2Q96JJ3 720 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 PSKH2Q96QS6 385 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 SELENOOQ9BVL4 669 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 NUDT9Q9BW91 350 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 EPB41L1Q9H4G0 881 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 PLEKHM1Q9Y4G2 1056 aa9.33□□□□□ -0.92
NEDD9-203ENST00000397378 ANKHD1Q8IWZ3 2542 aaKnown RBP9.33□□□□□ -0.92
NEDD9-203ENST00000397378 NIPBLQ6KC79 2804 aaeCLIP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 MN1Q10571 1320 aaPredicted RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GOLGA6CA6NDK9 693 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GOLGA6BA6NDN3 693 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 EIF3CLB5ME19 914 aaKnown RBP9.32□□□□□ -0.92
NEDD9-203ENST00000397378 ZNF185O15231 689 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 FAM155BO75949 473 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 SOD1P00441 154 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 GOLGA6DP0CG33 693 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 CD1EP15812 388 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 BPIP17213 487 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 LHCGRP22888 699 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 PTGIRP43119 386 aa9.32□□□□□ -0.92
NEDD9-203ENST00000397378 MAPK9P45984 424 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms