RNA–Protein interactions for RNA: ENST00000397204.8

CAPN3-208, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,237 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-208ENST00000397204 PTRH1Q86Y79 214 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 LRRC49Q8IUZ0 686 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 NDUFAF2Q8N183 169 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 BBS5Q8N3I7 341 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 OR10G6Q8NH81 332 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 FNIP1Q8TF40 1166 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 PDCD6IPQ8WUM4 868 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 NSMCE1Q8WV22 266 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 PATE1Q8WXA2 126 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 KIAA1143Q96AT1 154 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 SH3KBP1Q96B97 665 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 AHCYL2Q96HN2 611 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 MCCC1Q96RQ3 725 aaPredicted RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 SNRNP25Q9BV90 132 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 TRIT1Q9H3H1 467 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ZWILCHQ9H900 591 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 FBXO8Q9NRD0 319 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 OCIAD1Q9NX40 245 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 CWC15Q9P013 229 aaKnown RBP8.71□□□□□ -1.02
CAPN3-208ENST00000397204 ANKMY1Q9P2S6 941 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 MYO6Q9UM54 1294 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 SCN8AQ9UQD0 1980 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 LRRK1Q38SD2 2015 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 CENPEQ02224 2701 aa8.71□□□□□ -1.02
CAPN3-208ENST00000397204 UTP20O75691 2785 aaKnown RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 EFCAB7A8K855 629 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 LGALS16A8MUM7 142 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 NKX2-8O15522 239 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 MAFKO60675 156 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PGLSO95336 258 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PEX11BO96011 259 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 GZMAP12544 262 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CDK11BP21127 795 aaKnown RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CES1P23141 567 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 MPSTP25325 297 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 GPR1P46091 355 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 MC1RQ01726 317 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 ABHD18Q0P651 414 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 DPYSQ14117 519 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 SKIDA1Q1XH10 827 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CRTC2Q53ET0 693 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PYCR3Q53H96 274 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 ARMC12Q5T9G4 340 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 MARC1Q5VT66 337 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 RAET1GQ6H3X3 334 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CEACAM20Q6UY09 585 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CYP4V2Q6ZWL3 525 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 USP45Q70EL2 814 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 ZNF765Q7L2R6 523 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 FAM129CQ86XR2 697 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 RAVER1Q8IY67 606 aaKnown RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 NRSN1Q8IZ57 195 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 NLGN4XQ8N0W4 816 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PGBD5Q8N414 524 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 SFRP1Q8N474 314 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 NPWQ8N729 165 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 BMPERQ8N8U9 685 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 NLGN4YQ8NFZ3 816 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 EXD1Q8NHP7 514 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 C9orf43Q8TAL5 461 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 APOBEC4Q8WW27 367 aaKnown RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PIH1D2Q8WWB5 315 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PMEPA1Q969W9 287 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 AP2M1Q96CW1 435 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 OR2M4Q96R27 311 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 SLC38A3Q99624 504 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 MGME1Q9BQP7 344 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 SYT11Q9BT88 431 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 ABCG8Q9H221 673 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 GPN2Q9H9Y4 310 aaPredicted RBP8.7□□□□□ -1.02
CAPN3-208ENST00000397204 ETNK1Q9HBU6 452 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 TAS2R14Q9NYV8 317 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 CHMP5Q9NZZ3 219 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 TMEM98Q9Y2Y6 226 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 PLEKHM1Q9Y4G2 1056 aa8.7□□□□□ -1.02
CAPN3-208ENST00000397204 UNC79Q9P2D8 2635 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TRBV23OR9-2A0A075B6M9 112 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CDC14CA4D256 554 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CLEC18AA5D8T8 446 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GOLGA6CA6NDK9 693 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GOLGA6BA6NDN3 693 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 NPIPB15A6NHN6 443 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 H3BRJ5 948 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 DUX1O43812 170 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 LRCH4O75427 683 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 FTLP02792 175 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GOLGA6DP0CG33 693 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 GP1BBP13224 206 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 ZNF30P17039 623 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 LHCGRP22888 699 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CSF2RBP32927 897 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 PCK1P35558 622 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 ARL4AP40617 200 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 NOP2P46087 812 aaKnown RBP8.69□□□□□ -1.02
CAPN3-208ENST00000397204 CDH6P55285 790 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 TRAF2Q12933 501 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 NCAPHQ15003 741 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 DPYSL2Q16555 572 aa8.69□□□□□ -1.02
CAPN3-208ENST00000397204 ANKS6Q68DC2 871 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms