RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 HOPXQ9BPY8 73 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 KIFC1Q9BW19 673 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 NXF3Q9H4D5 531 aaKnown RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 EHD1Q9H4M9 534 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 GSTO2Q9H4Y5 243 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 INTS7Q9NVH2 962 aaKnown RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 WDR70Q9NW82 654 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 MTRRQ9UBK8 725 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 SARDHQ9UL12 918 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 GIT1Q9Y2X7 761 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 COL11A1P12107 1806 aaPredicted RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 FRMPD3Q5JV73 1810 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 A0A1B0GTL3 188 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 AXLP30530 894 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 PSMD8P48556 350 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 KCNK10P57789 538 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 OR4D2P58180 307 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 MTPNP58546 118 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 IFITM3Q01628 133 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 FBXO47Q5MNV8 452 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 SLC22A16Q86VW1 577 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 CLIP4Q8N3C7 705 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 TERB1Q8NA31 727 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 TMBIM1Q969X1 311 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 OTUD5Q96G74 571 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 NPY6RQ99463 290 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 SPC25Q9HBM1 224 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 CD320Q9NPF0 282 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 PRDM8Q9NQV8 689 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 RBM22Q9NW64 420 aaKnown RBP eCLIP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 GJD2Q9UKL4 321 aa9.8□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF638Q14966 1978 aaKnown RBP9.8□□□□□ -0.84
TRIM39-203ENST00000396547 A0A087X1B8 175 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 SYCE1LA8MT33 242 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 FXYD1O00168 92 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 XPNPEP2O43895 674 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TSPAN1O60635 241 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 HTR1BP28222 390 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 VBP1P61758 197 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 UFM1P61960 85 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ZNF846Q147U1 533 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 INAVAQ3KP66 663 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 UNC50Q53HI1 259 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 HECTD2Q5U5R9 776 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 GLYATQ6IB77 296 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 CLYBLQ8N0X4 340 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TTC39CQ8N584 583 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ADAMTS16Q8TE57 1224 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 RAB2BQ8WUD1 216 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 FIG4Q92562 907 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ROPN1LQ96C74 230 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ACOX2Q99424 681 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 DOK1Q99704 481 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 BDH2Q9BUT1 245 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TOR3AQ9H497 397 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 HMG20AQ9NP66 347 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TRHDEQ9UKU6 1024 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 PCDHB3Q9Y5E6 796 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 SLC30A1Q9Y6M5 507 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ZSWIM8A7E2V4 1837 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 GAS2O43903 313 aaKnown RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 C22orf31O95567 290 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 S100BP04271 92 aaPredicted RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 RBP1P09455 135 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 PIRTP0C851 137 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 CYP2C9P11712 490 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 PAMP19021 973 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 NR4A2P43354 598 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 LBX1P52954 281 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 OAZ1P54368 228 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TMBIM6P55061 237 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 CDKN2DP55273 166 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 CRHR2Q13324 411 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 IRF5Q13568 498 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 MAPRE1Q15691 268 aaKnown RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 C9orf57Q5W0N0 161 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TAF2Q6P1X5 1199 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 SPRED1Q7Z699 444 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 LINC00523Q86TU6 105 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 C8orf59Q8N0T1 100 aaPredicted RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 SPARTQ8N0X7 666 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ATPAF2Q8N5M1 289 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 STARD8Q92502 1023 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 NSMCE2Q96MF7 247 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 RCOR3Q9P2K3 495 aaPredicted RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 VWA7Q9Y334 891 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TMED5Q9Y3A6 229 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 KCTD3Q9Y597 815 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TRIM64CA6NLI5 447 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 H0Y858 1186 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 AZIN1O14977 448 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 CDK14O94921 469 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 THRBP10828 461 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 TGFBR1P36897 503 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 ARCN1P48444 511 aaKnown RBP9.79□□□□□ -0.84
TRIM39-203ENST00000396547 RGS19P49795 217 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 POU4F1Q01851 419 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 LAPTM4AQ15012 233 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 PSMD5Q16401 504 aa9.79□□□□□ -0.84
TRIM39-203ENST00000396547 FAM110CQ1W6H9 321 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms