RNA–Protein interactions for RNA: ENST00000396526.7

SNX6-202, Transcript of sorting nexin 6, humanhuman

TSL 1 (best) BASIC

Gene SNX6, Length 3,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-202ENST00000396526 OSBPL1AQ9BXW6 950 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 SLC46A2Q9BY10 475 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 MEAF6Q9HAF1 191 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 ZBTB26Q9HCK0 441 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 MID1IP1Q9NPA3 183 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 MYLKQ15746 1914 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 TMEM233B4DJY2 109 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 K7ERQ8 282 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 KRT36O76013 467 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 S100BP04271 92 aaPredicted RBP16.05■□□□□ 0.16
SNX6-202ENST00000396526 PRSS56P0CW18 603 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 PTDSS1P48651 473 aaKnown RBP16.05■□□□□ 0.16
SNX6-202ENST00000396526 AAGABQ6PD74 315 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 ELMSAN1Q6PJG2 1045 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 PIANPQ8IYJ0 282 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 RBFAQ8N0V3 343 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 OR6K2Q8NGY2 324 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 PIH1D2Q8WWB5 315 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 ATOH8Q96SQ7 321 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 LRRC3Q9BY71 257 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 ASB8Q9H765 288 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 TBC1D14Q9P2M4 693 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 ZMYM5Q9UJ78 669 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 CDH22Q9UJ99 828 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 RWDD3Q9Y3V2 267 aa16.05■□□□□ 0.16
SNX6-202ENST00000396526 A0A088AWK7 358 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 A0A0J9YYE9 177 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 A0A1W2PQ67 120 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
SNX6-202ENST00000396526 XYLBO75191 536 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 TRBC1P01850 177 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 NFKBIAP25963 317 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 INHBCP55103 352 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 CDH13P55290 713 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 ZXDBP98169 803 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 PLPP4Q5VZY2 271 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 GRAMD4Q6IC98 578 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 GPSM1Q86YR5 675 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 DTX3LQ8TDB6 740 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 MTIF3Q9H2K0 278 aaKnown RBP16.04■□□□□ 0.16
SNX6-202ENST00000396526 CRLS1Q9UJA2 301 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 AZIN1O14977 448 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 ITGAXP20702 1163 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 KCNC1P48547 511 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 PTPN5P54829 565 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 FPGSQ05932 587 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 OR4D1Q15615 310 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 FRA10AC1Q70Z53 315 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 FBXW8Q8N3Y1 598 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 MRPL43Q8N983 215 aaKnown RBP16.04■□□□□ 0.16
SNX6-202ENST00000396526 SLC22A17Q8WUG5 538 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 CD274Q9NZQ7 290 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 DPP7Q9UHL4 492 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 GNPTGQ9UJJ9 305 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 TLL1O43897 1013 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 BNIP3LO60238 219 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 CSPG5O95196 566 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 MLYCDO95822 493 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 FGF4P08620 206 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 NNMTP40261 264 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 PEX6Q13608 980 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 TSNQ15631 228 aaKnown RBP16.04■□□□□ 0.16
SNX6-202ENST00000396526 SNX20Q7Z614 316 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 CMTM8Q8IZV2 173 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 ISG20Q96AZ6 181 aaKnown RBP16.04■□□□□ 0.16
SNX6-202ENST00000396526 LINGO1Q96FE5 620 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 TUBGCP5Q96RT8 1024 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 SLC4A7Q9Y6M7 1214 aa16.04■□□□□ 0.16
SNX6-202ENST00000396526 STX16-NPEPL1H3BU86 382 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 STX16O14662 325 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 HTRA2O43464 458 aaPredicted RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 SMAD6O43541 496 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 NIPSNAP2O75323 286 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 VPS4BO75351 444 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 PRAMEF1O95521 474 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 RPSAP08865 295 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 ALPIP09923 528 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 GNAZP19086 355 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 BMPR1AP36894 532 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 LCP2Q13094 533 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 RPS6KA2Q15349 733 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 GPR33Q49SQ1 333 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 PITRM1Q5JRX3 1037 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 TMEM198Q66K66 360 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 PSRC1Q6PGN9 363 aaPredicted RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 BNC2Q6ZN30 1099 aaPredicted RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 USP45Q70EL2 814 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 BIRC8Q96P09 236 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 SMIM14Q96QK8 99 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 COPG1Q9Y678 874 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 SOBPA7XYQ1 873 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 BAG2O95816 211 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 CCDC124Q96CT7 223 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 PSMD12O00232 456 aaPredicted RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 EEF1DP29692 281 aaKnown RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 CD70P32970 193 aa16.03■□□□□ 0.16
SNX6-202ENST00000396526 CDKN1CP49918 316 aaPredicted RBP16.03■□□□□ 0.16
SNX6-202ENST00000396526 CLCQ05315 142 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms