RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 CLCQ05315 142 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 TSNQ15631 228 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 SFT2D3Q587I9 215 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 LPCAT4Q643R3 524 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 ANKS6Q68DC2 871 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 CAPRIN2Q6IMN6 1127 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 DDX53Q86TM3 631 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 STK40Q8N2I9 435 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 EFHBQ8N7U6 833 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 KCNJ9Q92806 393 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 ASB9Q96DX5 294 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 NSUN5Q96P11 429 aaKnown RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 IL21Q9HBE4 155 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 MAGEE1Q9HCI5 957 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 ZNF334Q9HCZ1 680 aaPredicted RBP16.69■□□□□ 0.26
NUP50-202ENST00000396096 CCDC167Q9P0B6 97 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 IL17CQ9P0M4 197 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 VPS51Q9UID3 782 aa16.69■□□□□ 0.26
NUP50-202ENST00000396096 DENND4CQ5VZ89 1909 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 CARNS1A5YM72 827 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 BBIP1A8MTZ0 92 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 CDC7O00311 574 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 PPP6CO00743 305 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 TRIM24O15164 1050 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 NRP2O60462 931 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 VPS4BO75351 444 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 ESR1P03372 595 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 URODP06132 367 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 STX1BP61266 288 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 TRIP10Q15642 601 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 MMEL1Q495T6 779 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 PABPC1LQ4VXU2 614 aaKnown RBP16.68■□□□□ 0.26
NUP50-202ENST00000396096 SPOUT1Q5T280 376 aaKnown RBP16.68■□□□□ 0.26
NUP50-202ENST00000396096 ITIH5Q86UX2 942 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 GPR65Q8IYL9 337 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 CD200R1Q8TD46 325 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 TRPC4APQ8TEL6 797 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 ZNF483Q8TF39 744 aaPredicted RBP16.68■□□□□ 0.26
NUP50-202ENST00000396096 SLC22A12Q96S37 553 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 SLC30A3Q99726 388 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 P2RY12Q9H244 342 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 GALPQ9UBC7 116 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 SCOCQ9UIL1 159 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 TRMT6Q9UJA5 497 aaKnown RBP16.68■□□□□ 0.26
NUP50-202ENST00000396096 TBX21Q9UL17 535 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 ZNF711Q9Y462 761 aa16.68■□□□□ 0.26
NUP50-202ENST00000396096 ZNF106Q9H2Y7 1883 aaKnown RBP16.68■□□□□ 0.26
NUP50-202ENST00000396096 DPPA5A6NC42 116 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 PIP5K1BO14986 540 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 LAG3P18627 525 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 RFC2P35250 354 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 CSKP41240 450 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 MRPL19P49406 292 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 FOXA1P55317 472 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 CACNG1Q06432 222 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 ZRANB3Q5FWF4 1079 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 C1orf53Q5VUE5 145 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 FUNDC1Q8IVP5 155 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 BHLHE22Q8NFJ8 381 aaPredicted RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 BTBD9Q96Q07 612 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 NUSAP1Q9BXS6 441 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 TUBB1Q9H4B7 451 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 EBF3Q9H4W6 596 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 FBRSL1Q9HCM7 1045 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 SAGE1Q9NXZ1 904 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 SPG21Q9NZD8 308 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 PRSS51A0A1B0GVH4 220 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 ATP6AP2A0A1C7CYW4 349 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 NPEPPSL1A6NEC2 478 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 EIF4E1BA6NMX2 242 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 E7ENX8 843 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 BTN3A1O00481 513 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 MRASO14807 208 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 OR1I1O60431 355 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 NIPSNAP2O75323 286 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 ATP6AP2O75787 350 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 PGLSO95336 258 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 CAPNS1P04632 268 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 HMGCLP35914 325 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 VEGFBP49765 207 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 IL2P60568 153 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 MRPS22P82650 360 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 TRAP1Q12931 704 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 ADGRE1Q14246 886 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 TRIM25Q14258 630 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 EFL1Q7Z2Z2 1120 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 PCDH20Q8N6Y1 951 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 SIDT2Q8NBJ9 832 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 ROPN1LQ96C74 230 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 PDLIM5Q96HC4 596 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 BPIFA1Q9NP55 256 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 ADA2Q9NZK5 511 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 CD300AQ9UGN4 299 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 RIMS3Q9UJD0 308 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 FCF1Q9Y324 198 aaKnown RBP16.67■□□□□ 0.26
NUP50-202ENST00000396096 PKP3Q9Y446 797 aa16.67■□□□□ 0.26
NUP50-202ENST00000396096 SCN8AQ9UQD0 1980 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 MATN4O95460 622 aa16.66■□□□□ 0.26
NUP50-202ENST00000396096 LINGO3P0C6S8 592 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms