RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 PDE1CQ14123 709 aaPredicted RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 LRRC32Q14392 662 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 HECTD2Q5U5R9 776 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 FAM45BPQ6NSW5 357 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 TMEM92Q6UXU6 159 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 RAVER1Q8IY67 606 aaKnown RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 NRSN1Q8IZ57 195 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 FAM45AQ8TCE6 357 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 CCDC68Q9H2F9 335 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 FBXL12Q9NXK8 326 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 NFKBIL1Q9UBC1 381 aaPredicted RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 SERGEFQ9UGK8 458 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 ADAM21Q9UKJ8 722 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 SCML1Q9UN30 329 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 COQ6Q9Y2Z9 468 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 A0A096LPK6 155 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 KRBA1A5PL33 1030 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 AP1G1O43747 822 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 LZTS3O60299 673 aaPredicted RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 MMP20O60882 483 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 C6P13671 934 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 ACRV1P26436 265 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 TARSP26639 723 aaKnown RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 FMO4P31512 558 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 PTGER3P43115 390 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 CCT5P48643 541 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 SLC18A1P54219 525 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 RAB10P61026 200 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 MPP2Q14168 576 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 DBN1Q16643 649 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 TTC31Q49AM3 519 aaPredicted RBP20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 ATP13A5Q4VNC0 1218 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 PPM1JQ5JR12 505 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 Q6ZS52 159 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 MGARPQ8TDB4 240 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 SCAMP4Q969E2 229 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 SIPA1Q96FS4 1042 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 COQ10AQ96MF6 247 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 LMAN1LQ9HAT1 526 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 MKS1Q9NXB0 559 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 TLK1Q9UKI8 766 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 VWA7Q9Y334 891 aa20.29■□□□□ 0.84
VCPKMT-202ENST00000395860 AGAP14A8MT82 685 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 PHGDHO43175 533 aaKnown RBP20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TSPAN6O43657 245 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 OR1I1O60431 355 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 ZWINTO95229 277 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 C2P06681 752 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 GM2AP17900 193 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 CA5AP35218 305 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 STARD6P59095 220 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TAS2R39P59534 338 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 UBXN2BQ14CS0 331 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 SEPT7Q16181 437 aaKnown RBP20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 ZNF284Q2VY69 593 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TAF1BQ53T94 588 aaPredicted RBP20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 ZNF549Q6P9A3 640 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 NXPE1Q8N323 547 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 SYNPOQ8N3V7 929 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TCP10LQ8TDR4 215 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 ULK4Q96C45 1275 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 DTD2Q96FN9 168 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TSPAN17Q96FV3 270 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 RIOK2Q9BVS4 552 aaKnown RBP20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 ABCG8Q9H221 673 aa20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 INTS9Q9NV88 658 aaKnown RBP20.28■□□□□ 0.84
VCPKMT-202ENST00000395860 TCRBV21S2A2A0A5A6 115 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 TM9SF1O15321 606 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 PCDH8O95206 1070 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 ZNF7P17097 686 aaPredicted RBP20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 CRABP2P29373 138 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 CRHR1P34998 444 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 TAS2R38P59533 333 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 ZBTB16Q05516 673 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 CRY1Q16526 586 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 HENMT1Q5T8I9 393 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 CYP2U1Q7Z449 544 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 CEP97Q8IW35 865 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 SIX5Q8N196 739 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 ZNF687Q8N1G0 1237 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 TRAM1L1Q8N609 369 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 DTX3LQ8TDB6 740 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 AP2M1Q96CW1 435 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 OLFM1Q99784 485 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 AARSD1Q9BTE6 412 aaKnown RBP20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 ZSCAN5AQ9BUG6 496 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 LTB4R2Q9NPC1 389 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 DCDC2Q9UHG0 476 aa20.27■□□□□ 0.84
VCPKMT-202ENST00000395860 KANSL1LA0AUZ9 987 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 GLRA3O75311 464 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 RECQL5O94762 991 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ACADMP11310 421 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 MDH1P40925 334 aaKnown RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 GUCY1A3Q02108 690 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ZNF460Q14592 562 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 ZKSCAN8Q15776 578 aaPredicted RBP20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 UBALD2Q8IYN6 164 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 RBFAQ8N0V3 343 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 FLCNQ8NFG4 579 aa20.26■□□□□ 0.83
VCPKMT-202ENST00000395860 NUS1Q96E22 293 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms