RNA–Protein interactions for RNA: ENST00000395802.7

VAPB-202, Transcript of VAMP associated protein B and C, humanhuman

TSL 1 (best) BASIC

Gene VAPB, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-202ENST00000395802 HAUS5O94927 633 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ESR1P03372 595 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MPOP05164 745 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 BRAFP15056 766 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 STMN1P16949 149 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ACRV1P26436 265 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 CRABP2P29373 138 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 DPTQ07507 201 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 CHRNA6Q15825 494 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MAP7D1Q3KQU3 841 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 FAM45BPQ6NSW5 357 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 LCA5Q86VQ0 697 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 PGBD3Q8N328 593 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SPEM1Q8N4L4 309 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 TSTD1Q8NFU3 115 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 PJA1Q8NG27 643 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 OR14C36Q8NHC7 312 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 FAM45AQ8TCE6 357 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MZB1Q8WU39 189 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ERLEC1Q96DZ1 483 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 NUS1Q96E22 293 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 COQ10AQ96MF6 247 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 IQCGQ9H095 443 aaKnown RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 SGK2Q9HBY8 427 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SLC17A6Q9P2U8 582 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MUTYHQ9UIF7 546 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 TLK1Q9UKI8 766 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SIT1Q9Y3P8 196 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 TRBV5-4A0A0C4DH59 114 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 FAM95CA0A1B0GW59 222 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 LRRC72A6NJI9 287 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MMP20O60882 483 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ZNF217O75362 1048 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 RECQL5O94762 991 aaPredicted RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 CREB1P16220 341 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 NDUFV2P19404 249 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 OXTRP30559 389 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MDH1P40925 334 aaKnown RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 NSG1P42857 185 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SLC18A1P54219 525 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 GUCY1A3Q02108 690 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SGCGQ13326 291 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 USP10Q14694 798 aaKnown RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 AGERQ15109 404 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SEPT7Q16181 437 aaKnown RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 TAF1BQ53T94 588 aaPredicted RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 HENMT1Q5T8I9 393 aaKnown RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 PSAPL1Q6NUJ1 521 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 Q6ZS52 159 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 TRIM67Q6ZTA4 783 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 SERPINA9Q86WD7 417 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 NXPE1Q8N323 547 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 DCLK2Q8N568 766 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 GPATCH11Q8N954 259 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 HMGB4Q8WW32 186 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ISL2Q96A47 359 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 CLDN23Q96B33 292 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ATXN7L3BQ96GX2 97 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 TSNARE1Q96NA8 513 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 VPS35Q96QK1 796 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 COPS8Q99627 209 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 CLPBQ9H078 707 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 BTBD1Q9H0C5 482 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 MARCH4Q9P2E8 410 aaPredicted RBP13.6□□□□□ -0.23
VAPB-202ENST00000395802 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 VWA7Q9Y334 891 aa13.6□□□□□ -0.23
VAPB-202ENST00000395802 ATG2BQ96BY7 2078 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 UBA6A0AVT1 1052 aaPredicted RBP13.59□□□□□ -0.23
VAPB-202ENST00000395802 A6NNZ2 444 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 QSOX1O00391 747 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 PLK4O00444 970 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 PRMT5O14744 637 aaPredicted RBP13.59□□□□□ -0.23
VAPB-202ENST00000395802 SPINT1O43278 529 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 RPS3P23396 243 aaKnown RBP eCLIP13.59□□□□□ -0.234e-6■■■■■ 40.4
VAPB-202ENST00000395802 GABRB3P28472 473 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ADPRHP54922 357 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ZXDAP98168 799 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 BMPR2Q13873 1038 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 TUBB8Q3ZCM7 444 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 LDLRAP1Q5SW96 308 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 UGT3A1Q6NUS8 523 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 RAPH1Q70E73 1250 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 CAMKK1Q8N5S9 505 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 LPGAT1Q92604 370 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 DCUN1D1Q96GG9 259 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ELMO2Q96JJ3 720 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 FOXQ1Q9C009 403 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ZCCHC2Q9C0B9 1178 aaKnown RBP13.59□□□□□ -0.23
VAPB-202ENST00000395802 CHRDQ9H2X0 955 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ITM2CQ9NQX7 267 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ZDHHC3Q9NYG2 299 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.59□□□□□ -0.23
VAPB-202ENST00000395802 DCDC2Q9UHG0 476 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 CD84Q9UIB8 345 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 GNPTGQ9UJJ9 305 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 SLC39A10Q9ULF5 831 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 CRYL1Q9Y2S2 319 aa13.59□□□□□ -0.23
VAPB-202ENST00000395802 MTF2Q9Y483 593 aaPredicted RBP13.59□□□□□ -0.23
VAPB-202ENST00000395802 TBC1D3DA0A087WVF3 549 aa13.58□□□□□ -0.24
VAPB-202ENST00000395802 TBC1D3IA0A087WXS9 549 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms