RNA–Protein interactions for RNA: ENST00000395454.6

SCAF11-204, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF11, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-204ENST00000395454 KCTD4Q8WVF5 259 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 CDKN2AIPNLQ96HQ2 116 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 ELMO2Q96JJ3 720 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 OLFM1Q99784 485 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 ZNF395Q9H8N7 513 aaPredicted RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 POPDC3Q9HBV1 291 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 TXLNGQ9NUQ3 528 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 HACD3Q9P035 362 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 HAO1Q9UJM8 370 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 RPL26L1Q9UNX3 145 aaKnown RBP15.05■□□□□ 0
SCAF11-204ENST00000395454 SIT1Q9Y3P8 196 aa15.05■□□□□ 0
SCAF11-204ENST00000395454 H7C0S8 307 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 TRAFD1O14545 582 aaPredicted RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 CD3EAPO15446 510 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 ITM2AO43736 263 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 TRIM13O60858 407 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 RASSF9O75901 435 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 GOT2P00505 430 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 PDHA1P08559 390 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 MAPK8P45983 427 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 RECQLP46063 649 aaPredicted RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 KPNA2P52292 529 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 STC1P52823 247 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 ABCE1P61221 599 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 SNRPD1P62314 119 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 HNRNPA1L2Q32P51 320 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 LRRC8EQ6NSJ5 796 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 ATG14Q6ZNE5 492 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 PTAR1Q7Z6K3 402 aaPredicted RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 SYNPOQ8N3V7 929 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 FSTL5Q8N475 847 aaPredicted RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 MDGA1Q8NFP4 955 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 OR13C4Q8NGS5 318 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 OR6P1Q8NGX9 317 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 PPP1R14CQ8TAE6 165 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 STON2Q8WXE9 905 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 ISG20Q96AZ6 181 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 TSNARE1Q96NA8 513 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 WWP1Q9H0M0 922 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 FAM96AQ9H5X1 160 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 IGSF5Q9NSI5 407 aa15.05■□□□□ -0
SCAF11-204ENST00000395454 INTS10Q9NVR2 710 aaKnown RBP15.05■□□□□ -0
SCAF11-204ENST00000395454 TK2O00142 265 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 SYNCRIPO60506 623 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 HNRNPCL1O60812 293 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 ADAM23O75077 832 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 DCNP07585 359 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 T-ENOLP0DO92 83 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 CHRM1P11229 460 aaPredicted RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 HOXB2P14652 356 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 GRIA4P48058 902 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 FZD5Q13467 585 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 ITGA9Q13797 1035 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 ENPP2Q13822 863 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 HECTD2Q5U5R9 776 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 FAM45BPQ6NSW5 357 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 AFTPHQ6ULP2 937 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 MTDHQ86UE4 582 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 TTC30BQ8N4P2 665 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 GPATCH11Q8N954 259 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 OR2AP1Q8NGE2 309 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 OR4L1Q8NH43 312 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 FAM45AQ8TCE6 357 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 SREK1Q8WXA9 508 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 TCF12Q99081 682 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 MRPL57Q9BQC6 102 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 RASSF4Q9H2L5 321 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 MRPL46Q9H2W6 279 aaKnown RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 HEY2Q9UBP5 337 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 VWA7Q9Y334 891 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 PCDHGC4Q9Y5F7 938 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 EDDM13A0A1B0GTR0 161 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 C2orf81A6NN90 581 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 HTRA2O43464 458 aaPredicted RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 IGSF6O95976 241 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 FDXRP22570 491 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 SEMA3AQ14563 771 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 ZNF460Q14592 562 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 STARD3Q14849 445 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 CARD16Q5EG05 197 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 LIPMQ5VYY2 423 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 NAPRTQ6XQN6 538 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 DPY19L3Q6ZPD9 716 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 GLT6D1Q7Z4J2 308 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 OR2A12Q8NGT7 310 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 VOPP1Q96AW1 172 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 RMDN1Q96DB5 314 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 OSBPL6Q9BZF3 934 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 LRMDAQ9H2I8 198 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 SUDS3Q9H7L9 328 aaPredicted RBP15.04■□□□□ -0
SCAF11-204ENST00000395454 CATSPERZQ9NTU4 200 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 SUN2Q9UH99 717 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 ZFP69BQ9UJL9 534 aa15.04■□□□□ -0
SCAF11-204ENST00000395454 ZDBF2Q9HCK1 2354 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.03■□□□□ -0
SCAF11-204ENST00000395454 TMEM221A6NGB7 291 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 OR51F1A6NGY5 319 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 M0R296 226 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 CCL22O00626 93 aa15.03■□□□□ -0
SCAF11-204ENST00000395454 ZNF195O14628 629 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms