RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NPHS2Q9NP85 383 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 ZNF711Q9Y462 761 aa19.21■□□□□ 0.67
LMNB1-202ENST00000395354 EDDM13A0A1B0GTR0 161 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 A0A1W2PQ67 120 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 TMEM221A6NGB7 291 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 G3V2L1 256 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 M0R296 226 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 ADAM23O75077 832 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 RALBP11234 206 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 KCNA4P22459 653 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 PMLP29590 882 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 MYLK3Q32MK0 819 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 CARD16Q5EG05 197 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 RBM20Q5T481 1227 aaKnown RBP19.2■□□□□ 0.66
LMNB1-202ENST00000395354 ZYG11AQ6WRX3 759 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 Q6ZVU0 165 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 KCTD4Q8WVF5 259 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 CLDN23Q96B33 292 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 GPR78Q96P69 363 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 GABRG3Q99928 467 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 SIKE1Q9BRV8 207 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 POLR3BQ9NW08 1133 aaPredicted RBP19.2■□□□□ 0.66
LMNB1-202ENST00000395354 PKP3Q9Y446 797 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 ANKRD36A6QL64 1941 aa19.2■□□□□ 0.66
LMNB1-202ENST00000395354 A0A0J9YYE9 177 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 POP4O95707 220 aaKnown RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 TRBC1P01850 177 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 MYL2P10916 166 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 HMGCLP35914 325 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 RECQLP46063 649 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 RAD51Q06609 339 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 FAM83EQ2M2I3 478 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 AARS2Q5JTZ9 985 aaKnown RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 EOGTQ5NDL2 527 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 C9orf64Q5T6V5 341 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 AGAP9Q5VTM2 703 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 CES4AQ5XG92 561 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 LRRC8EQ6NSJ5 796 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 RYBPQ8N488 228 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 TMEM151AQ8N4L1 468 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 OR2A12Q8NGT7 310 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 ZNF641Q96N77 438 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 OLFM1Q99784 485 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 IL17CQ9P0M4 197 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 MUC22E2RYF6 1773 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 TMEM114B3SHH9 223 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 CHURC1-FNTBB4DL54 471 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SYNCRIPO60506 623 aaKnown RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 TRIM13O60858 407 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 ATG13O75143 517 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 WISP3O95389 354 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 FDXRP22570 491 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 GMPRP36959 345 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 RPS9P46781 194 aaKnown RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SLC1A6P48664 564 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SUOXP51687 545 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 OVGP1Q12889 678 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SEMA3AQ14563 771 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SETDB1Q15047 1291 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 SPDYAQ5MJ70 313 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 DPY19L3Q6ZPD9 716 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 LDB1Q86U70 411 aaPredicted RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 ECHDC3Q96DC8 303 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 UBXN10Q96LJ8 280 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 RMDN2Q96LZ7 410 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 LYSMD1Q96S90 227 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 NDNQ99608 321 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 MRPL57Q9BQC6 102 aaKnown RBP19.19■□□□□ 0.66
LMNB1-202ENST00000395354 GPR63Q9BZJ6 419 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 PRSS16Q9NQE7 514 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 ABCF3Q9NUQ8 709 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 OXSMQ9NWU1 459 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 PPIL1Q9Y3C6 166 aa19.19■□□□□ 0.66
LMNB1-202ENST00000395354 CAPN8A6NHC0 703 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 TARM1B6A8C7 271 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 PIGNO95427 931 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 DCNP07585 359 aaKnown RBP19.18■□□□□ 0.66
LMNB1-202ENST00000395354 LTA4HP09960 611 aaKnown RBP19.18■□□□□ 0.66
LMNB1-202ENST00000395354 HOXB2P14652 356 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 TTPAP49638 278 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 ASPHQ12797 758 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 GAS6Q14393 721 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 GALNTL6Q49A17 601 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 KLC3Q6P597 504 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 FSTL5Q8N475 847 aaPredicted RBP19.18■□□□□ 0.66
LMNB1-202ENST00000395354 OR6K2Q8NGY2 324 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 RFWD2Q8NHY2 731 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 NXNL1Q96CM4 212 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 ERLEC1Q96DZ1 483 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 SCYL1Q96KG9 808 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 SMIM14Q96QK8 99 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 AARSD1Q9BTE6 412 aaKnown RBP19.18■□□□□ 0.66
LMNB1-202ENST00000395354 MRPL46Q9H2W6 279 aaKnown RBP19.18■□□□□ 0.66
LMNB1-202ENST00000395354 GPAMQ9HCL2 828 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 IGSF5Q9NSI5 407 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 KCNK4Q9NYG8 393 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 FKBPLQ9UIM3 349 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 MMP17Q9ULZ9 603 aa19.18■□□□□ 0.66
LMNB1-202ENST00000395354 PI15O43692 258 aa19.17■□□□□ 0.66
LMNB1-202ENST00000395354 NDUFS3O75489 264 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms