RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 COX4I2Q96KJ9 171 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 BBS2Q9BXC9 721 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CATSPERBQ9H7T0 1116 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ABT1Q9ULW3 272 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 LSM1O15116 133 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CPSF4O95639 269 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CST1P01037 141 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ATP5BP06576 529 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 CNPP09543 421 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 LRRC74AQ0VAA2 488 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 OVOS1Q6IE37 1185 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 UBE2J2Q8N2K1 259 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 LPCAT1Q8NF37 534 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 TPD52L3Q96J77 140 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 TEKT5Q96M29 485 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 IFT80Q9P2H3 777 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 TRHDEQ9UKU6 1024 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 DEAF1O75398 565 aaPredicted RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ATE1O95260 518 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ITGB1P05556 798 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ARHGDIAP52565 204 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 MEP1AQ16819 746 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 MFSD4BQ5TF39 518 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PTRHD1Q6GMV3 140 aaKnown RBP13.17□□□□□ -0.3
NFKB1-202ENST00000394820 MRNIPQ6NTE8 343 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PAGE2Q7Z2X7 111 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SFRP1Q8N474 314 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 RDH11Q8TC12 318 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 HERC2P3Q9BVR0 1158 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ARHGAP39Q9C0H5 1083 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SLC39A8Q9C0K1 460 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 GBA3Q9H227 469 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SLC38A7Q9NVC3 462 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 PADI3Q9ULW8 664 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 RNF11Q9Y3C5 154 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 SH3BP1Q9Y3L3 701 aa13.17□□□□□ -0.3
NFKB1-202ENST00000394820 ZCWPW2A0A1B0GU75 182 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 I6L893 689 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TLR5O60602 858 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 AXLP30530 894 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 OR1E1P30953 314 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 LHX1P48742 406 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TPTEP56180 551 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 AASDHQ4L235 1098 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CENPLQ8N0S6 344 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CLYBLQ8N0X4 340 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CENPSQ8N2Z9 138 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TOP6BLQ8N6T0 577 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 OR7A2PQ8NGA2 310 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ANKRD49Q8WVL7 239 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SMARCD1Q96GM5 515 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 PRDM5Q9NQX1 630 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SMPD3Q9NY59 655 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 GALPQ9UBC7 116 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 RIMS3Q9UJD0 308 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ARL5AQ9Y689 179 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SLC12A8A0AV02 714 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 AXIN1O15169 862 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 XPNPEP2O43895 674 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 RECQL5O94762 991 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 STAU1O95793 577 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 FADS2O95864 444 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ZNF865P0CJ78 1059 aaPredicted RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ELNP15502 786 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SLC7A1P30825 629 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SLC39A12Q504Y0 691 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SLC2A7Q6PXP3 512 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SPPL2BQ8TCT7 592 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 UTP15Q8TED0 518 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TAMM41Q96BW9 452 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 FAM210AQ96ND0 272 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TMLHEQ9NVH6 421 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SMPD4Q9NXE4 827 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 GDAP2Q9NXN4 497 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 KLQ9UEF7 1012 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TRMT6Q9UJA5 497 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ANKRD6Q9Y2G4 727 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TTC3P53804 2025 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 NPEPPSL1A6NEC2 478 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 IQCF5A8MTL0 148 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ARPC2O15144 300 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CYP7B1O75881 506 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 JAK1P23458 1154 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 MTHFRP42898 656 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 IDH2P48735 452 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 FOXA1P55317 472 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 UFM1P61960 85 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 RPL38P63173 70 aaKnown RBP13.16□□□□□ -0.3
NFKB1-202ENST00000394820 ARHGEF7Q14155 803 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 RAB39AQ14964 217 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TGFBIQ15582 683 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 PSMD5Q16401 504 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 SYT16Q17RD7 645 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 CMPK2Q5EBM0 449 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 TIFABQ6ZNK6 161 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 LRRC8DQ7L1W4 858 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 P3H2Q8IVL5 708 aa13.16□□□□□ -0.3
NFKB1-202ENST00000394820 C8orf59Q8N0T1 100 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms