RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 Q9H521 79 aa13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 SOX17Q9H6I2 414 aaPredicted RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 TLR8Q9NR97 1041 aaKnown RBP13.43□□□□□ -0.26
GTF2F1-201ENST00000394456 MICAL3Q7RTP6 2002 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 HGFP14210 728 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC5A2P31639 672 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 PSMD8P48556 350 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 C18orf21Q32NC0 220 aaPredicted RBP13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 DHFR2Q86XF0 187 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC15A3Q8IY34 581 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 TEX26Q8N6G2 289 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 TADA1Q96BN2 335 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 TUBGCP3Q96CW5 907 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF597Q96LX8 424 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 ATOH8Q96SQ7 321 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 TTPALQ9BTX7 342 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 C1orf50Q9BV19 199 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 MUC3BQ9H195 1237 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 BPIFA1Q9NP55 256 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 IL37Q9NZH6 218 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 POLG2Q9UHN1 485 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF225Q9UK10 706 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SMIM31A0A1B0GVY4 71 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 NPEPPSL1A6NEC2 478 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SUPT3HB4E1H0 165 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 DLGAP1O14490 977 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 HTRA2O43464 458 aaPredicted RBP13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SUPT3HO75486 399 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 ATF6P18850 670 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC6A4P31645 630 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 HTR7P34969 479 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 FUT11Q495W5 492 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.42□□□□□ -0.262e-8■■■■■ 31.3
GTF2F1-201ENST00000394456 SLC22A9Q8IVM8 553 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 CLYBLQ8N0X4 340 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 DNAJB14Q8TBM8 379 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 CCDC126Q96EE4 140 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 FAR2Q96K12 515 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 TMEM74Q96NL1 305 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 CDK15Q96Q40 435 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 OLAHQ9NV23 265 aa13.42□□□□□ -0.26
GTF2F1-201ENST00000394456 FAM92AA1XBS5 289 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 ASPDHA6ND91 283 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PITPNM1O00562 1244 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 AZIN1O14977 448 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CASP2P42575 452 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SGSHP51688 502 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 RPL26P61254 145 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TRIP4Q15650 581 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 HABP4Q5JVS0 413 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 FAM45BPQ6NSW5 357 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PIANPQ8IYJ0 282 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CPNE9Q8IYJ1 553 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CRIPAKQ8N1N5 446 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 ATP6V0D2Q8N8Y2 350 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 FAM45AQ8TCE6 357 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SPON2Q9BUD6 331 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 MRPS26Q9BYN8 205 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 HIPK3Q9H422 1215 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 HSFX1Q9UBD0 423 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 EVLQ9UI08 416 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC4A7Q9Y6M7 1214 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 IQCF5A8MTL0 148 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TMX2-CTNND1H3BSU7 103 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TBC1D4O60343 1298 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TLR5O60602 858 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SEC24DO94855 1032 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PAPSS2O95340 614 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 SLC7A1P30825 629 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 RPS24P62847 133 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PLIN5Q00G26 463 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 NRG1Q02297 640 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PLOD1Q02809 727 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 ZNF235Q14590 738 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 PAGE3Q5JUK9 113 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TMCO2Q7Z6W1 182 aaPredicted RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CARM1Q86X55 608 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 LGI2Q8N0V4 545 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CBR4Q8N4T8 237 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 MDGA1Q8NFP4 955 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 OR4K2Q8NGD2 314 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 OR4L1Q8NH43 312 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 STON2Q8WXE9 905 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 BTN2A3PQ96KV6 586 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 GPATCH1Q9BRR8 931 aaKnown RBP13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CATSPERZQ9NTU4 200 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 BCAP29Q9UHQ4 241 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 hCG_2014768A0A024R1R8 64 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 IGLV3-10A0A075B6K4 115 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 ECI2O75521 394 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 RHOBTB1O94844 696 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 STX1BP61266 288 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 ZBTB49Q6ZSB9 765 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 FAM47BQ8NA70 645 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CATSPER1Q8NEC5 780 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 OR2T11Q8NH01 316 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 CDKN2AIPNLQ96HQ2 116 aa13.41□□□□□ -0.26
GTF2F1-201ENST00000394456 GPR21Q99679 349 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms