RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 PRPSAP1Q14558 356 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 OASLQ15646 514 aaKnown RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 SMAD1Q15797 465 aaKnown RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PLA2G4EQ3MJ16 856 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ATP13A5Q4VNC0 1218 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 KHDC1Q4VXA5 237 aaKnown RBP7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF569Q5MCW4 686 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM151BQ6UXP7 276 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 UNQ6494/PRO21346Q6UXR6 183 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMPRSS7Q7RTY8 843 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 GKN2Q86XP6 184 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 FAM181AQ8N9Y4 354 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TTC13Q8NBP0 860 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRIM58Q8NG06 486 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PATE1Q8WXA2 126 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCDC74AQ96AQ1 378 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 MS4A14Q96JA4 679 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PDLIM2Q96JY6 352 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TBATAQ96M53 351 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TBL1YQ9BQ87 522 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 FERMT1Q9BQL6 677 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 OR2AG1Q9H205 316 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 CARD9Q9H257 536 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 DPEP2Q9H4A9 486 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 KCTD5Q9NXV2 234 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 ATXN10Q9UBB4 475 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TMPRSS11EQ9UL52 423 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PYCARDQ9ULZ3 195 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 MSRB2Q9Y3D2 182 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PCDHB1Q9Y5F3 818 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 PCDHGA1Q9Y5H4 931 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 LAMA5O15230 3695 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 KNL1Q8NG31 2342 aa7.61□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRBV23OR9-2A0A075B6M9 112 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCDC78A2IDD5 438 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 AGRPO00253 132 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 PDE2AO00408 941 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 GAPDHSO14556 408 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 TPP1O14773 563 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 OPA1O60313 960 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 NOBOXO60393 691 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A9O60656 530 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 DNAJC6O75061 913 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 EML2O95834 649 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 EPOP01588 193 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 IVLP07476 585 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ACP5P13686 325 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 JUPP14923 745 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF8P17098 575 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A6P19224 532 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A1P22309 533 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A4P22310 534 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A3P35503 534 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A5P35504 534 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 SPAM1P38567 509 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ACTR1BP42025 376 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 KCNJ1P48048 391 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 TERF1P54274 439 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ACTR1AP61163 376 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 TARDBPQ13148 414 aaKnown RBP eCLIP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 MSLNQ13421 630 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CHRNA6Q15825 494 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 LONRF2Q1L5Z9 754 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 PARP6Q2NL67 630 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 PYCR3Q53H96 274 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 KCTD11Q693B1 232 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 DENND5AQ6IQ26 1287 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CRTC3Q6UUV7 619 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 RANBP10Q6VN20 620 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCNI2Q6ZMN8 369 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CHST15Q7LFX5 561 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 NLRP8Q86W28 1048 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 GALNT13Q8IUC8 556 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 HOMEZQ8IX15 550 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 SLC35F6Q8N357 371 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 TRAM1L1Q8N609 369 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ARL10Q8N8L6 244 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 Q8N9G6 341 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 OR13C4Q8NGS5 318 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 MDM1Q8TC05 714 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 MAPK15Q8TD08 544 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 GPBAR1Q8TDU6 330 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 GLYATL1Q969I3 302 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCDC97Q96F63 343 aaPredicted RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 OR2M4Q96R27 311 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 CCDC3Q9BQI4 270 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A7Q9HAW7 530 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A10Q9HAW8 530 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 UGT1A8Q9HAW9 530 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 IL26Q9NPH9 171 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 IL17CQ9P0M4 197 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 TAAR2Q9P1P5 351 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNHIT2Q9UHR6 403 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 FKBPLQ9UIM3 349 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 PADI4Q9UM07 663 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 ZNF148Q9UQR1 794 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 KCNK6Q9Y257 313 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 AAR2Q9Y312 384 aaKnown RBP7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 RNF215Q9Y6U7 377 aa7.6□□□□□ -1.19
HMGB3P1-201ENST00000393368 GLYATL1P3A0A0U1RQE8 302 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms