RNA–Protein interactions for RNA: ENST00000393118.6

CALD1-203, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,281 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-203ENST00000393118 CCDC159P0C7I6 412 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 HSPA1AP0DMV8 641 aaKnown RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 HSPA1BP0DMV9 641 aaKnown RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 CKBP12277 381 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ITGALP20701 1170 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 INHBCP55103 352 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TIGD2Q4W5G0 525 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 KLHL35Q6PF15 583 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 FAM151BQ6UXP7 276 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 LRRC8DQ7L1W4 858 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 MYO1HQ8N1T3 1032 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TWIST2Q8WVJ9 160 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 TSGA13Q96PP4 275 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 KCTD14Q9BQ13 255 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 TRIM54Q9BYV2 358 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ADNPQ9H2P0 1102 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 MARCH4Q9P2E8 410 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 RAI2Q9Y5P3 530 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 CCDC154A6NI56 674 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 I6L893 689 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 CNOT3O75175 753 aaKnown RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 ZBTB11O95625 1053 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 CYBBP04839 570 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 URODP06132 367 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 HIST1H2AGP0C0S8 130 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 HIST1H2ADP20671 130 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 HTR7P34969 479 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 YBEYP58557 167 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 IL10RBQ08334 325 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SFT2D3Q587I9 215 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 MTX3Q5HYI7 312 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 FOXB2Q5VYV0 432 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 SMYD5Q6GMV2 418 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 UGT3A1Q6NUS8 523 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 PAQR3Q6TCH7 311 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 OR56A4Q8NGH8 313 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 NT5C3BQ969T7 300 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 FUBP3Q96I24 572 aaKnown RBP eCLIP10.5□□□□□ -0.73
CALD1-203ENST00000393118 HIST1H2AHQ96KK5 128 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 OLFM1Q99784 485 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 HIST1H2AJQ99878 128 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 H2AFJQ9BTM1 129 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 GPR62Q9BZJ7 368 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ASB8Q9H765 288 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 PLAC1Q9HBJ0 212 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 C6orf203Q9P0P8 240 aaPredicted RBP10.5□□□□□ -0.73
CALD1-203ENST00000393118 FKBPLQ9UIM3 349 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 ACTL7AQ9Y615 435 aa10.5□□□□□ -0.73
CALD1-203ENST00000393118 FAM149AA5PLN7 773 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 PIP5K1BO14986 540 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 ACSL4O60488 711 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 FOXD2O60548 495 aaPredicted RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 ENTPD1P49961 510 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 NEDD8Q15843 81 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 ADRM1Q16186 407 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 TMTC4Q5T4D3 741 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MSANTD2Q6P1R3 559 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 AFTPHQ6ULP2 937 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 ARHGAP12Q8IWW6 846 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 FAM126BQ8IXS8 530 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 SMYD1Q8NB12 490 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 DLG3Q92796 817 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MTFMTQ96DP5 389 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 IL12RB2Q99665 862 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 NOL11Q9H8H0 719 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 CARD8Q9Y2G2 431 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 ZNF510Q9Y2H8 683 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MYO9BQ13459 2157 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 NPHS1O60500 1241 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 EOMESO95936 686 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 IL1BP01584 269 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 ARMC12Q5T9G4 340 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 CST9Q5W186 159 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 CES4AQ5XG92 561 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 EFL1Q7Z2Z2 1120 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 CILP2Q8IUL8 1156 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 CENPLQ8N0S6 344 aaPredicted RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 ELMOD1Q8N336 334 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 C2CD4AQ8NCU7 369 aaPredicted RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 MRPS31Q92665 395 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 RMND5BQ96G75 393 aaPredicted RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 MRPS26Q9BYN8 205 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 SCML2Q9UQR0 700 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 TMED5Q9Y3A6 229 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MYO7AQ13402 2215 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 HTR3EA5X5Y0 456 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 SH3BGRLO75368 114 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MFN2O95140 757 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 JUNP05412 331 aaKnown RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 HSPA13P48723 471 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 PGFP49763 221 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 HK2P52789 917 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 REP15Q6BDI9 236 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 BRSK1Q8TDC3 778 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 OMA1Q96E52 524 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 PGAP3Q96FM1 320 aaPredicted RBP10.49□□□□□ -0.73
CALD1-203ENST00000393118 RNF145Q96MT1 663 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 KCNA7Q96RP8 456 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 PCDH12Q9NPG4 1184 aa10.49□□□□□ -0.73
CALD1-203ENST00000393118 MTF2Q9Y483 593 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms