RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 SECISBP2Q96T21 854 aaKnown RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 C1QTNF7Q9BXJ2 289 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 MED28Q9H204 178 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KLHL31Q9H511 634 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 POLE3Q9NRF9 147 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 INTS7Q9NVH2 962 aaKnown RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TMEM216Q9P0N5 145 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 UBQLN2Q9UHD9 624 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 HACL1Q9UJ83 578 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 MTF2Q9Y483 593 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PCDHGB6Q9Y5F9 930 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CLUHO75153 1309 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 DFNA5O60443 496 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ERN1O75460 977 aaKnown RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ITGAVP06756 1048 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 SRCP12931 536 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PRKAR1BP31321 381 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GPC1P35052 558 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 DDOSTP39656 456 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KCNK10P57789 538 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 PSMC5P62195 406 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CCDC157Q569K6 752 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 GLYATQ6IB77 296 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 LURAP1LQ8IV03 231 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 MCOLN2Q8IZK6 566 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 TMEM199Q8N511 208 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CPT1BQ92523 772 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 VAT1Q99536 393 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KCNS3Q9BQ31 491 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 CHCHD6Q9BRQ6 235 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 KCTD10Q9H3F6 313 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 RERGLQ9H628 205 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 AJAP1Q9UKB5 411 aaPredicted RBP7.6□□□□□ -1.19
VTI1A-201ENST00000393077 FZD1Q9UP38 647 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 NDUFAF1Q9Y375 327 aa7.6□□□□□ -1.19
VTI1A-201ENST00000393077 ENPP3O14638 875 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 HNRNPDLO14979 420 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ORC5O43913 435 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PLIN3O60664 434 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PSIP1O75475 530 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 INMTO95050 263 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SERPINA1P01009 418 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 GPIP06744 558 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 MPSTP25325 297 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 DPYSL3Q14195 570 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FRG1Q14331 258 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FGFBP1Q14512 234 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 KCTD2Q14681 263 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 EMC2Q15006 297 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 MEP1AQ16819 746 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 DDR2Q16832 855 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SETMARQ53H47 684 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 TMEM198Q66K66 360 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 BICRALQ6AI39 1079 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ARHGAP36Q6ZRI8 547 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CPSF7Q8N684 471 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ATG16L2Q8NAA4 619 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SRFBP1Q8NEF9 429 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FBXW5Q969U6 566 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ZUFSPQ96AP4 578 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 RIOX1Q9H6W3 641 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ACTR10Q9NZ32 417 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ADGRE2Q9UHX3 823 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 MAB21L2Q9Y586 359 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SNCAIPQ9Y6H5 919 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ATRNO75882 1429 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ADGRA2Q96PE1 1338 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 WNT10BO00744 389 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 UGT2B11O75310 529 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SLITRK5O94991 958 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 GCAP28676 217 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 GNA15P30679 374 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CDH6P55285 790 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SNTA1Q13424 505 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PIGHQ14442 188 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 USP10Q14694 798 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SNAPC1Q16533 368 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CDKL4Q5MAI5 379 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 INTS11Q5TA45 600 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ZNF704Q6ZNC4 412 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 LINC00299Q6ZSB3 139 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CREB3L2Q70SY1 520 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 RNF135Q8IUD6 432 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 REM2Q8IYK8 340 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 GLIS1Q8NBF1 620 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 DAGLBQ8NCG7 672 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 TRPV3Q8NET8 790 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 CLHC1Q8NHS4 586 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ITFG1Q8TB96 612 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 HYLS1Q96M11 299 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 EIF2AK1Q9BQI3 630 aaKnown RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SLC30A2Q9BRI3 323 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 WACQ9BTA9 647 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 DPCDQ9BVM2 203 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 FRMD8P1Q9BZ68 369 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 HDHD2Q9H0R4 259 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 PRMT8Q9NR22 394 aaPredicted RBP7.59□□□□□ -1.19
VTI1A-201ENST00000393077 ERVK13-1Q9NX77 482 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 KLF15Q9UIH9 416 aa7.59□□□□□ -1.19
VTI1A-201ENST00000393077 SLC39A10Q9ULF5 831 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms