RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 IL7RP16871 459 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 APOBEC1P41238 236 aaKnown RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 MMP14P50281 582 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 VAMP2P63027 116 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 EEF1A1P68104 462 aaKnown RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 COG7P83436 770 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 PTP4A2Q12974 167 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 PPIGQ13427 754 aaKnown RBP eCLIP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 TRPC3Q13507 836 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 DRAP1Q14919 205 aaPredicted RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 TMEM35AQ53FP2 167 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 WDR38Q5JTN6 314 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 FAM69AQ5T7M9 428 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 EEF1A1P5Q5VTE0 462 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 NAA35Q5VZE5 725 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 C18orf63Q68DL7 685 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 SIGIRRQ6IA17 410 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 TTI2Q6NXR4 508 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF497Q6ZNH5 498 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 NOTCH2NLQ7Z3S9 236 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 RBM15BQ8NDT2 890 aaKnown RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 IGSF8Q969P0 613 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 RNF125Q96EQ8 232 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 PCGF1Q9BSM1 259 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 BARHL1Q9BZE3 327 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 KIF9Q9HAQ2 790 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 SLC28A3Q9HAS3 691 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 ABI3Q9P2A4 366 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 INTS6Q9UL03 887 aaKnown RBP3.15□□□□□ -1.91
TRAV40-201ENST00000390467 MMP24Q9Y5R2 645 aa3.15□□□□□ -1.91
TRAV40-201ENST00000390467 A0A1W2PP11 408 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 RRN3P2A6NIE6 340 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 BLOC1S5-TXNDC5H3BN57 136 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 NCAM2O15394 837 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 SYNGR3O43761 229 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 CTSVO60911 334 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 MLYCDO95822 493 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 F9P00740 461 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 ABCD3P28288 659 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 CPOXP36551 454 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 UBA7P41226 1012 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 PIP4K2AP48426 406 aaPredicted RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 AMPHP49418 695 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 GNB1P62873 340 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 PMP22Q01453 160 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 NEXNQ0ZGT2 675 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 GAGE5Q13069 117 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 GAGE6Q13070 117 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 BAK1Q16611 211 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 ZNF704Q6ZNC4 412 aaPredicted RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 C15orf39Q6ZRI6 1047 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 ANO5Q75V66 913 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 GPR180Q86V85 440 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 MYPOPQ86VE0 399 aaPredicted RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 APLFQ8IW19 511 aaPredicted RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 MAP7D3Q8IWC1 876 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 ADSSL1Q8N142 457 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 FCAMRQ8WWV6 532 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 PSPC1Q8WXF1 523 aaKnown RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 TM9SF4Q92544 642 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 HVCN1Q96D96 273 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 RRNAD1Q96FB5 475 aaKnown RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 SCRN2Q96FV2 425 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 UPF2Q9HAU5 1272 aaKnown RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 LTB4R2Q9NPC1 389 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 SLC52A3Q9NQ40 469 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 MARCH4Q9P2E8 410 aaPredicted RBP3.14□□□□□ -1.91
TRAV40-201ENST00000390467 FBXL2Q9UKC9 423 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 KCNK7Q9Y2U2 307 aa3.14□□□□□ -1.91
TRAV40-201ENST00000390467 IGKV3D-15A0A087WSY6 115 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 OR5K3A6NET4 321 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 LRRC53A6NM62 1247 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 SMIM1B2RUZ4 78 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 FAM90A26D6RGX4 464 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 TMEM178BH3BS89 294 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 HOXC11O43248 304 aaPredicted RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 AHRP35869 848 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 ARCN1P48444 511 aaKnown RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 HSD17B4P51659 736 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 PLIN5Q00G26 463 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 TBX2Q13207 712 aaPredicted RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 CDONQ4KMG0 1287 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 KRTCAP3Q53RY4 240 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 DCST1Q5T197 706 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 SFMBT2Q5VUG0 894 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 SLC27A1Q6PCB7 646 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 ATF7IPQ6VMQ6 1270 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 CACNA2D4Q7Z3S7 1137 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 STPG4Q8N801 248 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 ADAD2Q8NCV1 583 aaKnown RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 OR14L1PQ8NHC6 308 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 THAP6Q8TBB0 222 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 GTF3C6Q969F1 213 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 SENP5Q96HI0 755 aaPredicted RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 NR1H4Q96RI1 486 aaPredicted RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 VEZTQ9HBM0 779 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 ASAH2Q9NR71 780 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 PCDHB16Q9NRJ7 776 aa3.13□□□□□ -1.91
TRAV40-201ENST00000390467 MAP3K20Q9NYL2 800 aaKnown RBP3.13□□□□□ -1.91
TRAV40-201ENST00000390467 KLHL9Q9P2J3 617 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms