RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ANKUB1A6NFN9 424 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 NPIPB15A6NHN6 443 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 C21orf140B9A014 251 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 PES1O00541 588 aaKnown RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 FGF10O15520 208 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 KIF1CO43896 1103 aaKnown RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 UBXN7O94888 489 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 TIAF1O95411 115 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 CBX6O95503 412 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 ATP1A1P05023 1023 aaKnown RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 ANKRD34CP0C6C1 535 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 SLC2A4P14672 509 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 LHCGRP22888 699 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 PTPN4P29074 926 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 PTGIRP43119 386 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 RENBPP51606 427 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 AP1S1P61966 158 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 NSUN2Q08J23 767 aaKnown RBP eCLIP9.54□□□□□ -0.88
IFT88-203ENST00000389373 RAPSNQ13702 412 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 WDR59Q6PJI9 974 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 FAM92BQ6ZTR7 304 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 RHOT1Q8IXI2 618 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 CBARPQ8N350 705 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 RBMXL3Q8N7X1 1067 aaKnown RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 FDCSPQ8NFU4 85 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 SLC20A1Q8WUM9 679 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 SEC14L1Q92503 715 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 SCAMP4Q969E2 229 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 TIGD1Q96MW7 591 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 RANBP9Q96S59 729 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 AGAP2Q99490 1192 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 OSGEPL1Q9H4B0 414 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 EPB41L1Q9H4G0 881 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 PDE7BQ9NP56 450 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 MLXIPLQ9NP71 852 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 GPATCH2LQ9NWQ4 482 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 OGFRQ9NZT2 677 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 CPNE7Q9UBL6 633 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 PHTF1Q9UMS5 762 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 FARSAQ9Y285 508 aaKnown RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 PCYT1BQ9Y5K3 369 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 FHOD1Q9Y613 1164 aa9.54□□□□□ -0.88
IFT88-203ENST00000389373 MN1Q10571 1320 aaPredicted RBP9.54□□□□□ -0.88
IFT88-203ENST00000389373 SHANK1Q9Y566 2161 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 KIR2DS5A0A0G2JLQ3 304 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 A0A0G2JNG1 304 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 A0A1W2PQ67 120 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 KIR2DS3K7RE56 304 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 EEF2KO00418 725 aaKnown RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 CCP110O43303 1012 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 DNAJC6O75061 913 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 SOD1P00441 154 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 VIPP01282 170 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 C9P02748 559 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 FGF5P12034 268 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 F3P13726 295 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 MMP8P22894 467 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 TEAD1P28347 426 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 PDE1BQ01064 536 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 DPTQ07507 201 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 IL10RAQ13651 578 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 ZNF235Q14590 738 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 RFTN1Q14699 578 aaPredicted RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 LBRQ14739 615 aaKnown RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 KIR2DS5Q14953 304 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 KYNUQ16719 465 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 PLEKHN1Q494U1 663 aaPredicted RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.53□□□□□ -0.88
IFT88-203ENST00000389373 IRGCQ6NXR0 463 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 ADAMTSL4Q6UY14 1074 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 TECPR1Q7Z6L1 1165 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 SYVN1Q86TM6 617 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 TRIM48Q8IWZ4 208 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 MCEMP1Q8IX19 187 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 IQCKQ8N0W5 287 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 TTC30BQ8N4P2 665 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 SIDT2Q8NBJ9 832 aaKnown RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 PNPLA2Q96AD5 504 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 PLEKHG4BQ96PX9 1271 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 HERPUD2Q9BSE4 406 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 RIOK2Q9BVS4 552 aaKnown RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 NUDT9Q9BW91 350 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 GPR87Q9BY21 358 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 BRD8Q9H0E9 1235 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 KIAA1468Q9P260 1216 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 RARRES3Q9UL19 164 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 PCDHGB7Q9Y5F8 929 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 SLC30A1Q9Y6M5 507 aa9.53□□□□□ -0.88
IFT88-203ENST00000389373 ZNF106Q9H2Y7 1883 aaKnown RBP9.53□□□□□ -0.88
IFT88-203ENST00000389373 LILRA5A6NI73 299 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 OR5K4A6NMS3 321 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 HAX1O00165 279 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 PSMD11O00231 422 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 HTRA2O43464 458 aaPredicted RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 GFPT2O94808 682 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 PRKCSHP14314 528 aaPredicted RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 HNRNPH3P31942 346 aaKnown RBP9.52□□□□□ -0.89
IFT88-203ENST00000389373 GLRBP48167 497 aa9.52□□□□□ -0.89
IFT88-203ENST00000389373 ITGA1P56199 1179 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms