RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 MSANTD3Q96H12 275 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 SPATA16Q9BXB7 569 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 MKRN2Q9H000 416 aaKnown RBP26.66■■□□□ 1.86
MSX1-201ENST00000382723 CCDC68Q9H2F9 335 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 FAM83DQ9H4H8 585 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 ZNF358Q9NW07 568 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 F5P12259 2224 aa26.66■■□□□ 1.86
MSX1-201ENST00000382723 A0A1W2PQF6 199 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 ADH1BP00325 375 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 LSP1P33241 339 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 DRD3P35462 400 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 RPS14P62263 151 aaKnown RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 ATP13A5Q4VNC0 1218 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 TSPAN17Q96FV3 270 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 AARSD1Q9BTE6 412 aaKnown RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 SLC6A17Q9H1V8 727 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 ABCG8Q9H221 673 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 GRID1Q9ULK0 1009 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 CORO1CQ9ULV4 474 aaPredicted RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 CA14Q9ULX7 337 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 DUSP12Q9UNI6 340 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 COQ6Q9Y2Z9 468 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 MYO10Q9HD67 2058 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 SCN8AQ9UQD0 1980 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 SHOX2O60902 331 aaPredicted RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 PTGER3P43115 390 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 SUOXP51687 545 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 IRX4P78413 519 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 PIP5KL1Q5T9C9 394 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 N4BP2L1Q5TBK1 243 aaPredicted RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 PIM3Q86V86 326 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 HDDC3Q8N4P3 179 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 CCDC97Q96F63 343 aaPredicted RBP26.65■■□□□ 1.86
MSX1-201ENST00000382723 TTC1Q99614 292 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 ACOT9Q9Y305 439 aa26.65■■□□□ 1.86
MSX1-201ENST00000382723 TRBV5-4A0A0C4DH59 114 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 A6NNZ2 444 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 C5AR1P21730 350 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 ACRV1P26436 265 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 PPARGP37231 505 aaPredicted RBP26.64■■□□□ 1.86
MSX1-201ENST00000382723 IL9RQ01113 521 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 CCINQ13939 588 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 MLF2Q15773 248 aaPredicted RBP26.64■■□□□ 1.86
MSX1-201ENST00000382723 TUBB8Q3ZCM7 444 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 GPR33Q49SQ1 333 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 ARMC2Q8NEN0 867 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 BIRC8Q96P09 236 aa26.64■■□□□ 1.86
MSX1-201ENST00000382723 A0A1W2PP55 124 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 WDR91A4D1P6 747 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 MMP20O60882 483 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 ILF2Q12905 390 aaKnown RBP26.63■■□□□ 1.85
MSX1-201ENST00000382723 FBXO43Q4G163 708 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 TECPR1Q7Z6L1 1165 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 NXPE1Q8N323 547 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 SPATA6LQ8N4H0 392 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 NAT14Q8WUY8 206 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 RIOK2Q9BVS4 552 aaKnown RBP26.63■■□□□ 1.85
MSX1-201ENST00000382723 BOCQ9BWV1 1114 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 SERGEFQ9UGK8 458 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 ANKRD6Q9Y2G4 727 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 H0Y858 1186 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 GM2AP17900 193 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 ETV4P43268 484 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 CLEC14AQ86T13 490 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 TMPRSS6Q8IU80 811 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 ADHFE1Q8IWW8 467 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 GANCQ8TET4 914 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 KCTD4Q8WVF5 259 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 RAB7BQ96AH8 199 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 GPAMQ9HCL2 828 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 TMEM216Q9P0N5 145 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 EMCNQ9ULC0 261 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 MTF2Q9Y483 593 aaPredicted RBP26.63■■□□□ 1.85
MSX1-201ENST00000382723 FADS3Q9Y5Q0 445 aa26.63■■□□□ 1.85
MSX1-201ENST00000382723 WNT9AO14904 365 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 RNASEH2AO75792 299 aaKnown RBP26.62■■□□□ 1.85
MSX1-201ENST00000382723 RHOBTB1O94844 696 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 PKMP14618 531 aaKnown RBP26.62■■□□□ 1.85
MSX1-201ENST00000382723 FDXRP22570 491 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 ITGA9Q13797 1035 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 CTSL3PQ5NE16 218 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 LYPLAL1Q5VWZ2 237 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 CCDC63Q8NA47 563 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 UNKQ9C0B0 810 aaKnown RBP26.62■■□□□ 1.85
MSX1-201ENST00000382723 RAD18Q9NS91 495 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 ATG2BQ96BY7 2078 aa26.62■■□□□ 1.85
MSX1-201ENST00000382723 PSMD11O00231 422 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 MAN2B1O00754 1011 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 C6P13671 934 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 ZNF7P17097 686 aaPredicted RBP26.61■■□□□ 1.85
MSX1-201ENST00000382723 DCDC1P59894 354 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 TIAL1Q01085 375 aaKnown RBP eCLIP26.61■■□□□ 1.85
MSX1-201ENST00000382723 INSCQ1MX18 579 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 TMEM52BQ4KMG9 183 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 AGBL4Q5VU57 503 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 RBFAQ8N0V3 343 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 CXorf40AQ8TE69 158 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 CKAP2Q8WWK9 683 aa26.61■■□□□ 1.85
MSX1-201ENST00000382723 COQ10AQ96MF6 247 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms