RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 PACSIN1Q9BY11 444 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 ZMYND15Q9H091 742 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 DTLQ9NZJ0 730 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 VPS18Q9P253 973 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 UVRAGQ9P2Y5 699 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 ZNHIT2Q9UHR6 403 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 CNOT6Q9ULM6 557 aaKnown RBP16.73■□□□□ 0.27
SMN2-201ENST00000380741 RPL26L1Q9UNX3 145 aaKnown RBP16.73■□□□□ 0.27
SMN2-201ENST00000380741 PRKAB1Q9Y478 270 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 PCDHGA3Q9Y5H0 932 aa16.73■□□□□ 0.27
SMN2-201ENST00000380741 FADS2P1A8MWK0 482 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 MMP2P08253 660 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 KRT7P08729 469 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 MX2P20592 715 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 CSTF2P33240 577 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMN2-201ENST00000380741 CD86P42081 329 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 SPINT3P49223 89 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 NFATC3Q12968 1075 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 QPCTQ16769 361 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 HENMT1Q5T8I9 393 aaKnown RBP16.72■□□□□ 0.27
SMN2-201ENST00000380741 TMEM71Q6P5X7 295 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 CHST15Q7LFX5 561 aaPredicted RBP16.72■□□□□ 0.27
SMN2-201ENST00000380741 CCDC13Q8IYE1 715 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 CCNYQ8ND76 341 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 CCDC112Q8NEF3 446 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 HTR3CQ8WXA8 447 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 ART4Q93070 314 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 HDAC11Q96DB2 347 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 SLC38A3Q99624 504 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 DPYSL5Q9BPU6 564 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 IFNKQ9P0W0 207 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 B3GALT1Q9Y5Z6 326 aa16.72■□□□□ 0.27
SMN2-201ENST00000380741 GOLGA6L19H0YKK7 550 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 KCNK1O00180 336 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 JCHAINP01591 159 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 H2AFZP0C0S5 128 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 FAM87AP0C7U9 286 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 PPM1FP49593 454 aaPredicted RBP16.71■□□□□ 0.27
SMN2-201ENST00000380741 CHCHD2P9Q5T1J5 151 aaPredicted RBP16.71■□□□□ 0.27
SMN2-201ENST00000380741 FAM182AQ5T1J6 154 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 ZFYVE27Q5T4F4 411 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 H2AFVQ71UI9 128 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 PRICKLE2Q7Z3G6 844 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 CTNNBL1Q8WYA6 563 aaPredicted RBP16.71■□□□□ 0.27
SMN2-201ENST00000380741 RAPGEF5Q92565 580 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 NKD1Q969G9 470 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 AHCYL2Q96HN2 611 aaKnown RBP16.71■□□□□ 0.27
SMN2-201ENST00000380741 MLPHQ9BV36 600 aaPredicted RBP16.71■□□□□ 0.27
SMN2-201ENST00000380741 DDA1Q9BW61 102 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 FAM83DQ9H4H8 585 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 OCIAD1Q9NX40 245 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 SLC39A1Q9NY26 324 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 PKD2L2Q9NZM6 624 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 TBC1D29Q9UFV1 150 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 KCNK6Q9Y257 313 aa16.71■□□□□ 0.27
SMN2-201ENST00000380741 ANKRD66B4E2M5 251 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 DUX1O43812 170 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 ACP5P13686 325 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 KDELR1P24390 212 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 HNRNPH3P31942 346 aaKnown RBP16.7■□□□□ 0.26
SMN2-201ENST00000380741 MAN1A1P33908 653 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 UGT1A3P35503 534 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 ATP1A2P50993 1020 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 HHEXQ03014 270 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 PPIDQ08752 370 aaKnown RBP16.7■□□□□ 0.26
SMN2-201ENST00000380741 ZBTB17Q13105 803 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 GALNT3Q14435 633 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 SLC18A3Q16572 532 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 TBR1Q16650 682 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 XKR5Q6UX68 686 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 FAM129CQ86XR2 697 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 CNTD1Q8N815 330 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 OR10G6Q8NH81 332 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 ZNF830Q96NB3 372 aaPredicted RBP16.7■□□□□ 0.26
SMN2-201ENST00000380741 RNF157Q96PX1 679 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 SARS2Q9NP81 518 aaKnown RBP16.7■□□□□ 0.26
SMN2-201ENST00000380741 STARD5Q9NSY2 213 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 PDP2Q9P2J9 529 aa16.7■□□□□ 0.26
SMN2-201ENST00000380741 RGSL1A5PLK6 1076 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 A6NCN8 305 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 EFCAB7A8K855 629 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 B4E171 279 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 ITGB6P18564 788 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 TSPAN7P41732 249 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 IFI35P80217 286 aaPredicted RBP16.69■□□□□ 0.26
SMN2-201ENST00000380741 NFATC2Q13469 925 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 SNAP47Q5SQN1 464 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 IYDQ6PHW0 289 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 LYSMD3Q7Z3D4 306 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 IL22RA1Q8N6P7 574 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 PLD5Q8N7P1 536 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 BMPERQ8N8U9 685 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 CCHCR1Q8TD31 782 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 EID2BQ96D98 161 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 ADGRE3Q9BY15 652 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 ASPSCR1Q9BZE9 553 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 FAM117AQ9C073 453 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 RMI1Q9H9A7 625 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 LCMT1Q9UIC8 334 aa16.69■□□□□ 0.26
SMN2-201ENST00000380741 LRRD1A4D1F6 860 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms