RNA–Protein interactions for RNA: ENST00000380180.7

PDLIM5-205, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-205ENST00000380180 CA5AP35218 305 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 SERPINB5P36952 375 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 HK2P52789 917 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 EML3Q32P44 896 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 SEL1L3Q68CR1 1132 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 TPRG1Q6ZUI0 275 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 RPS27LQ71UM5 84 aaKnown RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 GDPD5Q8WTR4 605 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 UTP4Q969X6 686 aaKnown RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 MRGPRX3Q96LB0 322 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 DERL2Q9GZP9 239 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 P2RY12Q9H244 342 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 KLC4Q9NSK0 619 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 SORCS3Q9UPU3 1222 aa19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 EPB41L3Q9Y2J2 1087 aaPredicted RBP19.73■□□□□ 0.75
PDLIM5-205ENST00000380180 PRR5-ARHGAP8B1AHC4 643 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 ESR1P03372 595 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 ENO1P06733 434 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 CISD3P0C7P0 127 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 ADH5P11766 374 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 CHRM3P20309 590 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 ARHGAP8P85298 464 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 NFATC2Q13469 925 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 KCNC3Q14003 757 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 TCEAL5Q5H9L2 206 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 FAM78AQ5JUQ0 283 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 SNX20Q7Z614 316 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 SERPINA9Q86WD7 417 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 SIDT2Q8NBJ9 832 aaKnown RBP19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 EXT2Q93063 718 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 TBC1D10AQ9BXI6 508 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 PBX4Q9BYU1 374 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 COMMD10Q9Y6G5 202 aa19.72■□□□□ 0.75
PDLIM5-205ENST00000380180 TTC34A8MYJ7 566 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 SMIM24O75264 130 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 SNUPNO95149 360 aaKnown RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PAPLNO95428 1278 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 TPBGLP0DKB5 382 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT1A6P19224 532 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT1A1P22309 533 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT1A4P22310 534 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT1A3P35503 534 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 UGT1A5P35504 534 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 TTC31Q49AM3 519 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 LRRC66Q68CR7 880 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 GRAMD4Q6IC98 578 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 GDPD4Q6W3E5 623 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 USP45Q70EL2 814 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 NPAS3Q8IXF0 933 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PLPP6Q8IY26 295 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 CBARPQ8N350 705 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 KDM1BQ8NB78 822 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 GRIN3AQ8TCU5 1115 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 FRS2Q8WU20 508 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 KCNJ9Q92806 393 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 KIAA1191Q96A73 305 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 CCDC97Q96F63 343 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 ASIC4Q96FT7 647 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 KLHL32Q96NJ5 620 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 ATOH8Q96SQ7 321 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 NKX2-4Q9H2Z4 354 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 SFXN1Q9H9B4 322 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 TRMT6Q9UJA5 497 aaKnown RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 IKZF3Q9UKT9 509 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 GLYATL1P3A0A0U1RQE8 302 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 IQCF5A8MTL0 148 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 WASH3PC4AMC7 463 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 E5RI56 91 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 SLCO1B7G3V0H7 640 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PRMT5O14744 637 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 MGRN1O60291 552 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 CHRM1P11229 460 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 MTHFD2P13995 350 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PPARGP37231 505 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 NNMTP40261 264 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 RECQLP46063 649 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 DGKGP49619 791 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PTSQ03393 145 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 C12orf40Q86WS4 652 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 NKAPQ8N5F7 415 aaKnown RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 GIMAP7Q8NHV1 300 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 CD200R1Q8TD46 325 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 L3HYPDHQ96EM0 354 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 PPP1R36Q96LQ0 422 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 RAB3IPQ96QF0 476 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 OR52B2Q96RD2 323 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 MCCC1Q96RQ3 725 aaPredicted RBP19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 CIPCQ9C0C6 399 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 BRD9Q9H8M2 597 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 VTI1BQ9UEU0 232 aa19.71■□□□□ 0.75
PDLIM5-205ENST00000380180 TMEM233B4DJY2 109 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 UBXN8O00124 270 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 NCF2P19878 526 aaPredicted RBP19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ITGALP20701 1170 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 SPAM1P38567 509 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 ATP6V0D1P61421 351 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 NFKB2Q00653 900 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 TBCCQ15814 346 aa19.7■□□□□ 0.74
PDLIM5-205ENST00000380180 CHRNA6Q15825 494 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms