RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 ATP5F1P24539 256 aaPredicted RBP17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 SERPINB3P29508 390 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 UGT1A3P35503 534 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 UGT1A5P35504 534 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 SPAM1P38567 509 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 KDSRQ06136 332 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 GRM2Q14416 872 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 GRAMD4Q6IC98 578 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 BRAT1Q6PJG6 821 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 CERS6Q6ZMG9 384 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 RFLNAQ6ZTI6 216 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 MAVSQ7Z434 540 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 PHTF2Q8N3S3 785 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 SKA1Q96BD8 255 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 ACTR5Q9H9F9 607 aaPredicted RBP17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 IL36AQ9UHA7 158 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 SLC8A2Q9UPR5 921 aa17.25■□□□□ 0.35
THUMPD2-201ENST00000378727 PLXNB3Q9ULL4 1909 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 TCF20Q9UGU0 1960 aaKnown RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 TSPAN11A1L157 253 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 HSPA4LO95757 839 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ESR1P03372 595 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 C1SP09871 688 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ITGALP20701 1170 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 CD9P21926 228 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 POLR2LP62875 67 aaKnown RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 DLX2Q07687 328 aaPredicted RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ACTN3Q08043 901 aaPredicted RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 TDHQ8IZJ6 230 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 STK40Q8N2I9 435 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ZNF781Q8N8C0 355 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 GIMAP7Q8NHV1 300 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 EBF4Q9BQW3 602 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 BOCQ9BWV1 1114 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 S1PR5Q9H228 398 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 POMKQ9H5K3 350 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 A8MT66 165 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 MYO1CO00159 1063 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ZNF195O14628 629 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 LIG3P49916 1009 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 DNAJB13P59910 316 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 RCN2Q14257 317 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 ATAT1Q5SQI0 421 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 WDR75Q8IWA0 830 aaKnown RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 LSMEM2Q8N112 164 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 SIDT2Q8NBJ9 832 aaKnown RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 KCNJ9Q92806 393 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 PRR11Q96HE9 360 aaPredicted RBP17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 SYTL2Q9HCH5 934 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 GTSE1Q9NYZ3 720 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 IKZF3Q9UKT9 509 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 PLA2G4CQ9UP65 541 aa17.24■□□□□ 0.35
THUMPD2-201ENST00000378727 GOLGA8CPA6NN73 597 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 AGAP14A8MT82 685 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 IQCF5A8MTL0 148 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 PRMT5O14744 637 aaPredicted RBP17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 TBX10O75333 385 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 VPS26AO75436 327 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 FSBPO95073 299 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 TIMP2P16035 220 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ALOX15P16050 662 aaPredicted RBP17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ACRV1P26436 265 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 BMP8BP34820 402 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 OPRD1P41143 372 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ST8SIA6P61647 398 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 OR4D1Q15615 310 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ARL13AQ5H913 290 aaPredicted RBP17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 TRIM67Q6ZTA4 783 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 CLNKQ7Z7G1 428 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ALYREFQ86V81 257 aaKnown RBP17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 CD200R1Q8TD46 325 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 NAT14Q8WUY8 206 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 PBXIP1Q96AQ6 731 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 CHFRQ96EP1 664 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 KXD1Q9BQD3 176 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 SIKE1Q9BRV8 207 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 CYP4F12Q9HCS2 524 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 ZFP69BQ9UJL9 534 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 COMMD10Q9Y6G5 202 aa17.23■□□□□ 0.35
THUMPD2-201ENST00000378727 IPO13O94829 963 aaKnown RBP17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 TSPAN12O95859 305 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 PYGLP06737 847 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 PTPN5P54829 565 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 RUNX3Q13761 415 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 ZNF805Q5CZA5 627 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 CCNYL1Q8N7R7 359 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 TMEM237Q96Q45 408 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 OSBPL1AQ9BXW6 950 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 DERL2Q9GZP9 239 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 PRSS21Q9Y6M0 314 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 HLA-EP13747 358 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 RPS3P23396 243 aaKnown RBP eCLIP17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 MPSTP25325 297 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 SPINT3P49223 89 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 CLCN7P51798 805 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 NCALDP61601 193 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 ASPHQ12797 758 aa17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 EIF4HQ15056 248 aaKnown RBP17.22■□□□□ 0.35
THUMPD2-201ENST00000378727 CTC1Q2NKJ3 1217 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms