RNA–Protein interactions for RNA: ENST00000378169.7

NPHP4-203, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 4,213 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-203ENST00000378169 ADGRF1Q5T601 910 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 MSANTD2Q6P1R3 559 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 PAOXQ6QHF9 649 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 PIM3Q86V86 326 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 CXorf40AQ8TE69 158 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 PANX1Q96RD7 426 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 DNAJC28Q9NX36 388 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 H2AFY2Q9P0M6 372 aaPredicted RBP13.14□□□□□ -0.31
NPHP4-203ENST00000378169 TEKT2Q9UIF3 430 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 U3KQV3 271 aa13.14□□□□□ -0.31
NPHP4-203ENST00000378169 MAGEC1O60732 1142 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 FBXW4P57775 412 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 TJAP1Q5JTD0 557 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 BBS7Q8IWZ6 715 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 LPGAT1Q92604 370 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 MOCOSQ96EN8 888 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 CDKN2AIPNLQ96HQ2 116 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 TBC1D23Q9NUY8 699 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 YIPF1Q9Y548 306 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 TYROBPO43914 113 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 STK16O75716 305 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 LCP2Q13094 533 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 MTX3Q5HYI7 312 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 CERS6Q6ZMG9 384 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-203ENST00000378169 ACTRT2Q8TDY3 377 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 ABCB8Q9NUT2 735 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 PIP5K1BO14986 540 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 ALPIP09923 528 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 RRM2P31350 389 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 SLC18A2Q05940 514 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 MS4A13Q5J8X5 152 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 SIRPB2Q5JXA9 342 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 MFSD4BQ5TF39 518 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 IL23RQ5VWK5 629 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 METTL3Q86U44 580 aaKnown RBP13.13□□□□□ -0.31
NPHP4-203ENST00000378169 SAPCD2Q86UD0 394 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 PLD6Q8N2A8 252 aaKnown RBP13.13□□□□□ -0.31
NPHP4-203ENST00000378169 SNRNP27Q8WVK2 155 aaKnown RBP13.13□□□□□ -0.31
NPHP4-203ENST00000378169 GLMNQ92990 594 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF778Q96MU6 729 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 S100A14Q9HCY8 104 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 POLR3BQ9NW08 1133 aaPredicted RBP13.13□□□□□ -0.31
NPHP4-203ENST00000378169 AP4B1Q9Y6B7 739 aa13.13□□□□□ -0.31
NPHP4-203ENST00000378169 FAM149AA5PLN7 773 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CHRNA1P02708 482 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CAPN1P07384 714 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 S100A5P33763 92 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 RPIAP49247 311 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 HK2P52789 917 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 NUP107P57740 925 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CYP2A13Q16696 494 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 FGD3Q5JSP0 725 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 MTSS1LQ765P7 747 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 ZBTB46Q86UZ6 589 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SPPL2CQ8IUH8 684 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 ST13P5Q8NFI4 369 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SMG7Q92540 1137 aaKnown RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 WRAP53Q9BUR4 548 aaKnown RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 GPR62Q9BZJ7 368 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CACNA2D2Q9NY47 1150 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SELENONQ9NZV5 590 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SLC7A8Q9UHI5 535 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 MTMR11A4FU01 709 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 RGS5O15539 181 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 FTH1P02794 183 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SPAM1P38567 509 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CSKP41240 450 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 FOLH1Q04609 750 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 ADRM1Q16186 407 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CLDN19Q8N6F1 224 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 KREMEN2Q8NCW0 462 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 ATL1Q8WXF7 558 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 PPP1R16AQ96I34 528 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 DEC1Q9P2X7 70 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 FBXO10Q9UK96 956 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 ZNF490Q9ULM2 529 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 GLI3P10071 1580 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 AGRPO00253 132 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 RFXANKO14593 260 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 GRM6O15303 877 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 DLX3O60479 287 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CYP7B1O75881 506 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 IFNA14P01570 189 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 IDH2P48735 452 aaKnown RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CACNG1Q06432 222 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 DGCR6Q14129 220 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 NAIF1Q69YI7 327 aaPredicted RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 BNIPLQ7Z465 357 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
NPHP4-203ENST00000378169 COL26A1Q96A83 441 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 TCF25Q9BQ70 676 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 DGCR6LQ9BY27 220 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 PSMD13Q9UNM6 376 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 SLX4Q8IY92 1834 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 A0A0D9SEW6 157 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 RFPL1O75677 317 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 AQP1P29972 269 aa13.12□□□□□ -0.31
NPHP4-203ENST00000378169 CHN2P52757 468 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms