RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 ZFP36L2P47974 494 aaKnown RBP17.92■□□□□ 0.46
GNE-201ENST00000377902 PLIN5Q00G26 463 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 NFATC3Q12968 1075 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 LDLRAP1Q5SW96 308 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 PRMT9Q6P2P2 845 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 CENPSQ8N2Z9 138 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 BIRC7Q96CA5 298 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 HMCESQ96FZ2 354 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 CHID1Q9BWS9 393 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 ANAPC2Q9UJX6 822 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 CDH9Q9ULB4 789 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 COQ6Q9Y2Z9 468 aa17.92■□□□□ 0.46
GNE-201ENST00000377902 GOT2P00505 430 aaKnown RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 OCM2P0CE71 109 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 OCMP0CE72 109 aaPredicted RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 AAK1Q2M2I8 961 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 OR13C4Q8NGS5 318 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 ZNF420Q8TAQ5 688 aaPredicted RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 CSF3RQ99062 836 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 ATP13A1Q9HD20 1204 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 UXTQ9UBK9 157 aaPredicted RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 FAM50BQ9Y247 325 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 PTCH2Q9Y6C5 1203 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 KANSL1LA0AUZ9 987 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 FUOMA2VDF0 154 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 MROH6A6NGR9 719 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 UNCXA6NJT0 531 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 ENPP3O14638 875 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 LDB2O43679 373 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 MAP4P27816 1152 aaKnown RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 AGTR2P50052 363 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 SCNN1GP51170 649 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 OR4D2P58180 307 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 ADARB1P78563 741 aaKnown RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 NFKB2Q00653 900 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 PIGFQ07326 219 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 TIGD2Q4W5G0 525 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 TIGD7Q6NT04 549 aaPredicted RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 RTL3Q8N8U3 475 aaKnown RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 DDHD1Q8NEL9 900 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 BLOC1S5Q8TDH9 187 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 SLC16A10Q8TF71 515 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 PSMG2Q969U7 264 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.91■□□□□ 0.46
GNE-201ENST00000377902 MFSD1Q9H3U5 465 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 AGO3Q9H9G7 860 aaKnown RBP17.91■□□□□ 0.46
GNE-201ENST00000377902 ARNT2Q9HBZ2 717 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 CD320Q9NPF0 282 aa17.91■□□□□ 0.46
GNE-201ENST00000377902 A0A1W2PP18 115 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 CNTN5O94779 1100 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 F2P00734 622 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 GPIP06744 558 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 FAM163BP0C2L3 166 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 ZNF37AP17032 561 aaPredicted RBP17.9■□□□□ 0.46
GNE-201ENST00000377902 FDXRP22570 491 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 RELAQ04206 551 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 CLCQ05315 142 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 MFSD10Q14728 455 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 USP51Q70EK9 711 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 NANOGQ9H9S0 305 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 NMUR1Q9HB89 426 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 PKD2L2Q9NZM6 624 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 SUPT3HB4E1H0 165 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 FGF10O15520 208 aaPredicted RBP17.9■□□□□ 0.46
GNE-201ENST00000377902 SLC7A4O43246 635 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 SNAP91O60641 907 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 RSL1D1O76021 490 aaKnown RBP17.9■□□□□ 0.46
GNE-201ENST00000377902 MATN4O95460 622 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 C1RP00736 705 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 LDLRP01130 860 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 SLC2A3P11169 496 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 IL12AP29459 219 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 HOXC13P31276 330 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 CDC42EP1Q00587 391 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 CD300CQ08708 224 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 AFMIDQ63HM1 303 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 ANKRD34AQ69YU3 496 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 UGT3A1Q6NUS8 523 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 GALNT18Q6P9A2 607 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 PGBD5Q8N414 524 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 OR2T11Q8NH01 316 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 SNX19Q92543 992 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 ATOH8Q96SQ7 321 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 NTN4Q9HB63 628 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 HACD3Q9P035 362 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 CPA4Q9UI42 421 aa17.9■□□□□ 0.46
GNE-201ENST00000377902 C1orf232A0A0U1RR37 186 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 F8W810 466 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 SYNCRIPO60506 623 aaKnown RBP17.89■□□□□ 0.46
GNE-201ENST00000377902 CRCPO75575 148 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 CYBBP04839 570 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 THP07101 528 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 HLCSP50747 726 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 IST1P53990 364 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 KCNK10P57789 538 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 BEX3Q00994 111 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 ALFQ53S48 1182 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 CCNYL2Q5T2Q4 361 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 PIK3R6Q5UE93 754 aa17.89■□□□□ 0.46
GNE-201ENST00000377902 SLC2A7Q6PXP3 512 aa17.89■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms