RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 K7ERQ8 282 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 OLFM2O95897 454 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 GABRR2P28476 465 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 EEF1DP29692 281 aaKnown RBP20.1■□□□□ 0.81
VSX1-202ENST00000376709 CYP4F8P98187 520 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 KLC1Q07866 573 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 ZNF423Q2M1K9 1284 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 CYHR1Q6ZMK1 362 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 LARP4Q71RC2 724 aaKnown RBP eCLIP20.1■□□□□ 0.81
VSX1-202ENST00000376709 RNF148Q8N7C7 305 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 SIDT2Q8NBJ9 832 aaKnown RBP20.1■□□□□ 0.81
VSX1-202ENST00000376709 OR6K2Q8NGY2 324 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 UCMAQ8WVF2 138 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 ZNF711Q9Y462 761 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 STX16-NPEPL1H3BU86 382 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 H7C0S8 307 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 CDC7O00311 574 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 AZIN1O14977 448 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 ECI2O75521 394 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 CTPS1P17812 591 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 CHRM3P20309 590 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 AP1S1P61966 158 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 UGT3A2Q3SY77 523 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 CTSL3PQ5NE16 218 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 ARMC12Q5T9G4 340 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 RETSATQ6NUM9 610 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 RNF111Q6ZNA4 994 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 HMGCLL1Q8TB92 370 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 MRPS31Q92665 395 aaKnown RBP20.1■□□□□ 0.81
VSX1-202ENST00000376709 MYO19Q96H55 970 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 C3orf30Q96M34 536 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 SLC30A3Q99726 388 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 IKZF3Q9UKT9 509 aa20.1■□□□□ 0.81
VSX1-202ENST00000376709 NCF1BA6NI72 391 aaPredicted RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 NCF1CA8MVU1 366 aaPredicted RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 FZD6O60353 706 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 FGF4P08620 206 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 NCF1P14598 390 aaPredicted RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 XRCC1P18887 633 aaPredicted RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 DPP6P42658 865 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 STX1BP61266 288 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 LCP2Q13094 533 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 CEACAM7Q14002 265 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 PTK2BQ14289 1009 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 CAMK1DQ8IU85 385 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 APCDD1Q8J025 514 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 TWIST2Q8WVJ9 160 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 FUBP1Q96AE4 644 aaKnown RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 ALG14Q96F25 216 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 ECSITQ9BQ95 431 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 SARS2Q9NP81 518 aaKnown RBP20.09■□□□□ 0.81
VSX1-202ENST00000376709 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.09■□□□□ 0.81
VSX1-202ENST00000376709 BCAP29Q9UHQ4 241 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 SLC30A1Q9Y6M5 507 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 KIAA1671Q9BY89 1806 aa20.09■□□□□ 0.81
VSX1-202ENST00000376709 KIAA0355O15063 1070 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 GPR39O43194 453 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 EFCAB14O75071 495 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 ALPIP09923 528 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 ME2P23368 584 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 MSX2P35548 267 aaPredicted RBP20.08■□□□□ 0.81
VSX1-202ENST00000376709 PTGER3P43115 390 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 CLCN4P51793 760 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 IL2P60568 153 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 CLCQ05315 142 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 LRRC36Q1X8D7 754 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 FBXO48Q5FWF7 155 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 LYSMD3Q7Z3D4 306 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 DDIASQ8IXT1 998 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 TMEM199Q8N511 208 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 VCX3BQ9H321 246 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 MAGEE1Q9HCI5 957 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 FBRSL1Q9HCM7 1045 aaKnown RBP20.08■□□□□ 0.81
VSX1-202ENST00000376709 SEMA4BQ9NPR2 832 aaPredicted RBP20.08■□□□□ 0.81
VSX1-202ENST00000376709 UTP6Q9NYH9 597 aaKnown RBP20.08■□□□□ 0.81
VSX1-202ENST00000376709 PLK2Q9NYY3 685 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 IL17CQ9P0M4 197 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 ADAMTS6Q9UKP5 1117 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 MAFFQ9ULX9 164 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 SH3BP1Q9Y3L3 701 aa20.08■□□□□ 0.81
VSX1-202ENST00000376709 KIAA0100Q14667 2235 aaKnown RBP20.08■□□□□ 0.81
VSX1-202ENST00000376709 GFRA2O00451 464 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 CRCPO75575 148 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 FGF18O76093 207 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 PRAMEF12O95522 483 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 SNRPB2P08579 225 aaKnown RBP20.08■□□□□ 0.8
VSX1-202ENST00000376709 HMGCLP35914 325 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 FOXA1P55317 472 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 CDC16Q13042 620 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 KANK2Q63ZY3 851 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 ANKS6Q68DC2 871 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 FBXO46Q6PJ61 603 aaPredicted RBP20.08■□□□□ 0.8
VSX1-202ENST00000376709 SNX31Q8N9S9 440 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 CD200R1Q8TD46 325 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 KCNJ9Q92806 393 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 LINGO1Q96FE5 620 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 KCNA7Q96RP8 456 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 AKTIPQ9H8T0 292 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 ADA2Q9NZK5 511 aa20.08■□□□□ 0.8
VSX1-202ENST00000376709 CFAP97Q9P2B7 532 aa20.08■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms