RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 NSMCE3Q96MG7 304 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 ZNF641Q96N77 438 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 PSKH2Q96QS6 385 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 CINPQ9BW66 212 aaPredicted RBP12.14□□□□□ -0.47
LSM2-208ENST00000375661 BRD8Q9H0E9 1235 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 FOXJ2Q9P0K8 574 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 LRIT1Q9P2V4 623 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 TUBD1Q9UJT1 453 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 SNX12Q9UMY4 172 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 COQ6Q9Y2Z9 468 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 OR1A2Q9Y585 309 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
LSM2-208ENST00000375661 C9orf172C9J069 976 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 STMND1H3BQB6 276 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 KCNK1O00180 336 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 HGSO14964 777 aaPredicted RBP12.13□□□□□ -0.47
LSM2-208ENST00000375661 CPNE6O95741 557 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 JCHAINP01591 159 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 CCNB1P14635 433 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 CR2P20023 1033 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 MMP12P39900 470 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 ETV5P41161 510 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 ATP1A2P50993 1020 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 MAPK10P53779 464 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 IFI35P80217 286 aaPredicted RBP12.13□□□□□ -0.47
LSM2-208ENST00000375661 TLE1Q04724 770 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 NSUN2Q08J23 767 aaKnown RBP eCLIP12.13□□□□□ -0.47
LSM2-208ENST00000375661 AP1B1Q10567 949 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 ZBTB17Q13105 803 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 XRCC4Q13426 336 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 SIX1Q15475 284 aaPredicted RBP12.13□□□□□ -0.47
LSM2-208ENST00000375661 MARC1Q5VT66 337 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 PAPD7Q5XG87 772 aaKnown RBP12.13□□□□□ -0.47
LSM2-208ENST00000375661 NYAP1Q6ZVC0 841 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 PIM3Q86V86 326 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 CNTD1Q8N815 330 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 FAM46DQ8NEK8 389 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 GPBAR1Q8TDU6 330 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 COG1Q8WTW3 980 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 NSMCE1Q8WV22 266 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 TFB1MQ8WVM0 346 aaKnown RBP12.13□□□□□ -0.47
LSM2-208ENST00000375661 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 PDXPQ96GD0 296 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 MS4A14Q96JA4 679 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 QKIQ96PU8 341 aaKnown RBP eCLIP12.13□□□□□ -0.47
LSM2-208ENST00000375661 TUBGCP5Q96RT8 1024 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 OSBPL9Q96SU4 736 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 SUV39H2Q9H5I1 410 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 C10orf88Q9H8K7 445 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 PCDH12Q9NPG4 1184 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 RBM22Q9NW64 420 aaKnown RBP eCLIP12.13□□□□□ -0.47
LSM2-208ENST00000375661 ATP8A1Q9Y2Q0 1164 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 PCDHGA3Q9Y5H0 932 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 BSNQ9UPA5 3926 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 DOPEY2Q9Y3R5 2298 aa12.13□□□□□ -0.47
LSM2-208ENST00000375661 TTC24A2A3L6 582 aaPredicted RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 HACD1B0YJ81 288 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 PDE2AO00408 941 aaPredicted RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 PIGNO95427 931 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 FGGP02679 453 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 PCCBP05166 539 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 HLA-DQB2P05538 268 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 RBP3P10745 1247 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 WT1P19544 449 aaPredicted RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 PTPN3P26045 913 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 RBL1P28749 1068 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 MMP13P45452 471 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 CSNK1DP48730 415 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 LIG3P49916 1009 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 RENBPP51606 427 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 EIF3EP60228 445 aaKnown RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 MAXP61244 160 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 ETF1P62495 437 aaKnown RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 B4GALNT1Q00973 533 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 WASHC5Q12768 1159 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 ZNF235Q14590 738 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 NR1D2Q14995 579 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 CLCA4Q14CN2 919 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 TCEA2Q15560 299 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 MAP9Q49MG5 647 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 CFAP58Q5T655 872 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 PHF19Q5T6S3 580 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 BORAQ6PGQ7 559 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 TTC13Q8NBP0 860 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 SLC35B2Q8TB61 432 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 OR1E3Q8WZA6 343 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 FUBP1Q96AE4 644 aaKnown RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 NAPGQ99747 312 aaPredicted RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 MGME1Q9BQP7 344 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 SLC12A9Q9BXP2 914 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 CDH19Q9H159 772 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 DPEP2Q9H4A9 486 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 NT5MQ9NPB1 228 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 ANKMY1Q9P2S6 941 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 TTC7AQ9ULT0 858 aaPredicted RBP12.12□□□□□ -0.47
LSM2-208ENST00000375661 BOD1L1Q8NFC6 3051 aa12.12□□□□□ -0.47
LSM2-208ENST00000375661 TLN1Q9Y490 2541 aaKnown RBP12.11□□□□□ -0.47
LSM2-208ENST00000375661 TMEM202A6NGA9 273 aa12.11□□□□□ -0.47
LSM2-208ENST00000375661 B4DGG1 531 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms