RNA–Protein interactions for RNA: ENST00000375597.8

MCF2L-202, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-202ENST00000375597 SIRPB2Q5JXA9 342 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 DENND5AQ6IQ26 1287 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 PRRT2Q7Z6L0 340 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-202ENST00000375597 ITIH5Q86UX2 942 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 METTL6Q8TCB7 284 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 ZC3H15Q8WU90 426 aaKnown RBP11.74□□□□□ -0.53
MCF2L-202ENST00000375597 GLMNQ92990 594 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 DUS2Q9NX74 493 aaKnown RBP11.74□□□□□ -0.53
MCF2L-202ENST00000375597 IFT80Q9P2H3 777 aaPredicted RBP11.74□□□□□ -0.53
MCF2L-202ENST00000375597 A0A0D9SEW6 157 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 RBP1P09455 135 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 AGXTP21549 392 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 AQP1P29972 269 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 PNPLA4P41247 253 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 RPS9P46781 194 aaKnown RBP11.74□□□□□ -0.53
MCF2L-202ENST00000375597 SEPHS1P49903 392 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 SEMA3AQ14563 771 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 PTGR1Q14914 329 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 GTDC1Q4AE62 458 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 HEATR4Q86WZ0 1026 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 SLC16A10Q8TF71 515 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 NSMCE2Q96MF7 247 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 OSBPL6Q9BZF3 934 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 TM6SF2Q9BZW4 377 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 GSTO2Q9H4Y5 243 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 CATSPERBQ9H7T0 1116 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 ANAPC2Q9UJX6 822 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 HS3ST4Q9Y661 456 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 PHIPQ8WWQ0 1821 aa11.74□□□□□ -0.53
MCF2L-202ENST00000375597 BTBD19C9JJ37 291 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FZD9O00144 591 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CD3EAPO15446 510 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 BCL10O95999 233 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ATP5BP06576 529 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 PSMB9P28065 219 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ARCN1P48444 511 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 MASP1P48740 699 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 HTR6P50406 440 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 NKX2-5P52952 324 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 PRKAA2P54646 552 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CYP4F2P78329 520 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CYP4F3Q08477 520 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 UAP1L1Q3KQV9 507 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 STXBP5Q5T5C0 1151 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF554Q86TJ5 538 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ISCA2Q86U28 154 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 LSRQ86X29 649 aaPredicted RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ARHGAP12Q8IWW6 846 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 OR10A6Q8NH74 314 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FAM162AQ96A26 154 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FEM1AQ9BSK4 669 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CNGB3Q9NQW8 809 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FAM105AQ9NUU6 356 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 GMIPQ9P107 970 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF229Q9UJW7 825 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CORINQ9Y5Q5 1042 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 AP3B1O00203 1094 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 NCAM2O15394 837 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 MTSS1O43312 755 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 COL6A2P12110 1019 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 LBPP18428 481 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 MATN1P21941 496 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 TGFBR1P36897 503 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 RPL38P63173 70 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 GLYATQ6IB77 296 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CLYBLQ8N0X4 340 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 SLC15A4Q8N697 577 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CLDN19Q8N6F1 224 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 HTRA1Q92743 480 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CCDC28BQ9BUN5 200 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 RBM38Q9H0Z9 239 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 RIBC2Q9H4K1 309 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 LATS2Q9NRM7 1088 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 WDR81Q562E7 1941 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 MYADML2A6NDP7 307 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 H3BMQ9 156 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 VARSP26640 1264 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FMO3P31513 532 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CDK9P50750 372 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 CLCQ05315 142 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ZBTB6Q15916 424 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 FAM187BQ17R55 369 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF678Q5SXM1 525 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 ITFG1Q8TB96 612 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 NCSTNQ92542 709 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 COG8Q96MW5 612 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 SLC30A3Q99726 388 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 TDRD1Q9BXT4 1180 aaKnown RBP11.73□□□□□ -0.53
MCF2L-202ENST00000375597 HCSTQ9UBK5 93 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 IKZF3Q9UKT9 509 aa11.73□□□□□ -0.53
MCF2L-202ENST00000375597 TRIP12Q14669 1992 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 NBNO60934 754 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 CHEK2O96017 543 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 C1RP00736 705 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 FTH1P02794 183 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 ZNF37AP17032 561 aaPredicted RBP11.72□□□□□ -0.53
MCF2L-202ENST00000375597 SLC6A2P23975 617 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 PCSK1P29120 753 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 PSEN2P49810 448 aa11.72□□□□□ -0.53
MCF2L-202ENST00000375597 VAC14Q08AM6 782 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms