RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 FAM72AQ5TYM5 149 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAM72DQ6L9T8 149 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 PAGE2Q7Z2X7 111 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAM72BQ86X60 149 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 POC5Q8NA72 575 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 SLC7A6OSQ96CW6 309 aaPredicted RBP6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FAXDC2Q96IV6 333 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 FEM1CQ96JP0 617 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 TBATAQ96M53 351 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 BTBD9Q96Q07 612 aa6.52□□□□□ -1.37
SMC1A-202ENST00000375340 NT5C1B-RDH14C9J2C7 533 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 DLX3O60479 287 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 EDN1P05305 212 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 GRK3P35626 688 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CAPGP40121 348 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 COX10Q12887 443 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CPSF6Q16630 551 aaKnown RBP eCLIP6.51□□□□□ -1.372e-8■■□□□ 12.9
SMC1A-202ENST00000375340 KCTD3Q9Y597 815 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 A0A1B0GVG6 124 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 NADKO95544 446 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PIGRP01833 764 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ALDOAP04075 364 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 EPORP19235 508 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 FEN1P39748 380 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 GSTM5P46439 218 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 AIF1P55008 147 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 KLHL17Q6TDP4 642 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TRMT11Q7Z4G4 463 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SFRP1Q8N474 314 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 HOPXQ9BPY8 73 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 KCNS3Q9BQ31 491 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 FZD8Q9H461 694 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 FAM105AQ9NUU6 356 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 EXD2Q9NVH0 621 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PRKAG2Q9UGJ0 569 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF214Q9UL59 606 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SLX4Q8IY92 1834 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OR4F21O95013 312 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 THRBP10828 461 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CCNCP24863 283 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CSNK2BP67870 215 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CDK18Q07002 472 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 BBS7Q8IWZ6 715 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 DENND1AQ8TEH3 1009 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 UTP4Q969X6 686 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ZHX1-C8orf76Q96EF9 292 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PNPLA8Q9NP80 782 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 FPGTO14772 594 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 MYL12BO14950 172 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SIX3O95343 332 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CLIC3O95833 236 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SERPINA1P01009 418 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ASLP04424 464 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SEPHS1P49903 392 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PYDC2Q56P42 97 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ZNF57Q68EA5 555 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CMASQ8NFW8 434 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OR2T12Q8NG77 320 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OR10Q1Q8NGQ4 319 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 COX4I2Q96KJ9 171 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ZBTB26Q9HCK0 441 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 MAGEL2Q9UJ55 1249 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PQBP1O60828 265 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 UGT1A6P19224 532 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 IGFBP5P24593 272 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 LILRA4P59901 499 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SIM2Q14190 667 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 LRRC73Q5JTD7 316 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TSTD2Q5T7W7 516 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TLDC1Q6P9B6 456 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TXNDC11Q6PKC3 985 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OSTM1Q86WC4 334 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 HNRNPABQ99729 332 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 AKTIPQ9H8T0 292 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 KLHL1Q9NR64 748 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 INTS10Q9NVR2 710 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 NENFQ9UMX5 172 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 SH3GLB1Q9Y371 365 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PNMA8CA0A1B0GUJ8 204 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 A0A1W2PQ67 120 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 EI24O14681 340 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 KLF11O14901 512 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OTCP00480 354 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 T-ENOLP0DO92 83 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PRKCQQ04759 706 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TRIQKQ629K1 86 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 OR52J3Q8NH60 311 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ITCHQ96J02 903 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 PTCH2Q9Y6C5 1203 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 MATN3O15232 486 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 H6PDO95479 791 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 IGSF6O95976 241 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 ALDH2P05091 517 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 CKMT2P17540 419 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 INTS6LQ5JSJ4 861 aaKnown RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 THAP5Q7Z6K1 395 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 AKAP14Q86UN6 197 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 C2orf73Q8N5S3 287 aaPredicted RBP6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TMCO1Q9UM00 188 aa6.51□□□□□ -1.37
SMC1A-202ENST00000375340 TNPO3Q9Y5L0 923 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms