RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 OR2W6PQ8NHA6 318 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 CALML6Q8TD86 181 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 ZIM3Q96PE6 472 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 PLEKHG4BQ96PX9 1271 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 CDH19Q9H159 772 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 SUDS3Q9H7L9 328 aaPredicted RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 VIPAS39Q9H9C1 493 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 PREBQ9HCU5 417 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 ITM2CQ9NQX7 267 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 IARS2Q9NSE4 1012 aaKnown RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 NSMCE4AQ9NXX6 385 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 NFKBIL1Q9UBC1 381 aaPredicted RBP17.43■□□□□ 0.38
PFDN6-201ENST00000374606 APPL1Q9UKG1 709 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 SLC30A1Q9Y6M5 507 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 LRRK1Q38SD2 2015 aa17.43■□□□□ 0.38
PFDN6-201ENST00000374606 OR51F1A6NGY5 319 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 GOLGA8CPA6NN73 597 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 GOLGA8KD6RF30 607 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 POC1B-GALNT4F8VUJ3 575 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 GOLGA8TH3BQL2 631 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 WNT9AO14904 365 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 LZTS3O60299 673 aaPredicted RBP17.42■□□□□ 0.38
PFDN6-201ENST00000374606 PRAMEF1O95521 474 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 IGLV3-19P01714 112 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 C1QAP02745 245 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 ITGALP20701 1170 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 ETV3P41162 512 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 KIAA1161Q6NSJ0 714 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 NEPROQ6NW34 567 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 Q6ZVL8 140 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 MARK2Q7KZI7 788 aaKnown RBP17.42■□□□□ 0.38
PFDN6-201ENST00000374606 PTAR1Q7Z6K3 402 aaPredicted RBP17.42■□□□□ 0.38
PFDN6-201ENST00000374606 LMNTD2Q8IXW0 634 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 NRSN1Q8IZ57 195 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 IQCKQ8N0W5 287 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 GPR26Q8NDV2 337 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.42■□□□□ 0.38
PFDN6-201ENST00000374606 NUS1Q96E22 293 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 DTD2Q96FN9 168 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 COQ10AQ96MF6 247 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 PAFAH2Q99487 392 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 BTBD1Q9H0C5 482 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 ACBD3Q9H3P7 528 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 KDM4CQ9H3R0 1056 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 PPCSQ9HAB8 311 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 CD93Q9NPY3 652 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 SMYD2Q9NRG4 433 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 CATSPERZQ9NTU4 200 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF446Q9NWS9 450 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 VPS18Q9P253 973 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 TXNDC16Q9P2K2 825 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 COQ6Q9Y2Z9 468 aa17.42■□□□□ 0.38
PFDN6-201ENST00000374606 FASNP49327 2511 aaKnown RBP17.42■□□□□ 0.38
PFDN6-201ENST00000374606 LNP1A1A4G5 178 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 LRRC72A6NJI9 287 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 CXorf49A8MYA2 514 aaPredicted RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF217O75362 1048 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 PIAS1O75925 651 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 TM7SF2O76062 418 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 SRP72O76094 671 aaKnown RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 RECQL5O94762 991 aaPredicted RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 OGNP20774 298 aaKnown RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 FOXN2P32314 431 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 XIAPP98170 497 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 PEX6Q13608 980 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 ZNF284Q2VY69 593 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 FASTKD1Q53R41 847 aaKnown RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 ZRANB3Q5FWF4 1079 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 AARS2Q5JTZ9 985 aaKnown RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 MRNIPQ6NTE8 343 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 RFLNAQ6ZTI6 216 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 MICALCLQ6ZW33 695 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 CYP2U1Q7Z449 544 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 TECPR1Q7Z6L1 1165 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 LRRC6Q86X45 466 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 CNTN4Q8IWV2 1026 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 TMEM121BQ9BXQ6 578 aaPredicted RBP17.41■□□□□ 0.38
PFDN6-201ENST00000374606 TPSD1Q9BZJ3 242 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 FAM83DQ9H4H8 585 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 SGK2Q9HBY8 427 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 IL26Q9NPH9 171 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 SLC17A6Q9P2U8 582 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 FETUBQ9UGM5 382 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 EBF1Q9UH73 591 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 CD84Q9UIB8 345 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 CYP8B1Q9UNU6 501 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 WASF3Q9UPY6 502 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 NFS1Q9Y697 457 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 IKBKGQ9Y6K9 419 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 LAMA1P25391 3075 aa17.41■□□□□ 0.38
PFDN6-201ENST00000374606 ZZEF1O43149 2961 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3DA0A087WVF3 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3IA0A087WXS9 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3EA0A087X179 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3KA0A087X1G2 549 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3FA6NER0 549 aaPredicted RBP17.4■□□□□ 0.38
PFDN6-201ENST00000374606 FAM47DPA6NHR8 397 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 SMIM23A6NLE4 172 aa17.4■□□□□ 0.38
PFDN6-201ENST00000374606 TBC1D3LB9A6J9 549 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms