RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 REM2Q8IYK8 340 aaPredicted RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 TSEN15Q8WW01 171 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 UBE2E3Q969T4 207 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 RCN3Q96D15 328 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PTCD3Q96EY7 689 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 RNF157Q96PX1 679 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 ATG10Q9H0Y0 220 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 C12orf4Q9NQ89 552 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PTCH2Q9Y6C5 1203 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 DCLK1O15075 740 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 CHP2O43745 196 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 C1RP00736 705 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 HNRNPLP14866 589 aaKnown RBP eCLIP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MATKP42679 507 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MPPE1Q53F39 396 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 TTMPQ5BVD1 217 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 SLCO6A1Q86UG4 719 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PNPT1Q8TCS8 783 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PTCD2Q8WV60 388 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 KLK6Q92876 244 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 HAVCR1Q96D42 359 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 TDRD1Q9BXT4 1180 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 IL22Q9GZX6 179 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 RNPEPL1Q9HAU8 725 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MARK1Q9P0L2 795 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 ATP6AP2A0A1C7CYW4 349 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 ULK1O75385 1050 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 ATP6AP2O75787 350 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 SLC35G4P0C7Q5 338 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 TCEA1P23193 301 aaKnown RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MNDAP41218 407 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 FPGSQ05932 587 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PTPRNQ16849 979 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 PAGE2Q7Z2X7 111 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 MON1AQ86VX9 555 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 FAM71AQ8IYT1 594 aa14.27□□□□□ -0.13
TRAF1-201ENST00000373887 GPN3Q9UHW5 284 aaPredicted RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF214Q9UL59 606 aaPredicted RBP14.27□□□□□ -0.13
TRAF1-201ENST00000373887 RPTORQ8N122 1335 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 ENTPD5O75356 428 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 ALDH3A2P51648 485 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 LRRC73Q5JTD7 316 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 AFTPHQ6ULP2 937 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 NKAPQ8N5F7 415 aaKnown RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 S100ZQ8WXG8 99 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 TTLL2Q9BWV7 592 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MAPRE3Q9UPY8 281 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 PCDHA2Q9Y5H9 948 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 ZFP37Q9Y6Q3 630 aaPredicted RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MRC1P22897 1456 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 NRP2O60462 931 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 GPRIN3Q6ZVF9 776 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 JAZF1Q86VZ6 243 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 OR10H5Q8NGA6 315 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 IKZF2Q9UKS7 526 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MLYCDO95822 493 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 CYP1A2P05177 515 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 RAB25P57735 213 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 TAS2R40P59535 323 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 PCDH1Q08174 1060 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 FSTL1Q12841 308 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 CPSF6Q16630 551 aaKnown RBP eCLIP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 FUKQ8N0W3 1084 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 OR52K2Q8NGK3 314 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 CLHC1Q8NHS4 586 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 PIWIL2Q8TC59 973 aaKnown RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MCMBPQ9BTE3 642 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 TPK1Q9H3S4 243 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 ZNF224Q9NZL3 707 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 CCDC59Q9P031 241 aaKnown RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 SH3D21A4FU49 640 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 RFXANKO14593 260 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 LYPLA1O75608 230 aaPredicted RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 NADKO95544 446 aaPredicted RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 SMIM11AP58511 58 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 KCNJ2P63252 427 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 LDLRAP1Q5SW96 308 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 TNS4Q8IZW8 715 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 RELTQ969Z4 430 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 C1GALT1C1Q96EU7 318 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MYO19Q96H55 970 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 PPP3R2Q96LZ3 170 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 OR52E6Q96RD3 313 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 NPAS2Q99743 824 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MARCH7Q9H992 704 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 C8orf4Q9NR00 106 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 RBPJLQ9UBG7 517 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 GPR25O00155 361 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 LSM1O15116 133 aaKnown RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 TGFB1I1O43294 461 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 SNAP91O60641 907 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MSX2P35548 267 aaPredicted RBP14.26□□□□□ -0.13
TRAF1-201ENST00000373887 GMFBP60983 142 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 MYBPC3Q14896 1274 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 CLEC4DQ8WXI8 215 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 GMEB1Q9Y692 573 aa14.26□□□□□ -0.13
TRAF1-201ENST00000373887 AP2A2O94973 939 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 FSBPO95073 299 aa14.25□□□□□ -0.13
TRAF1-201ENST00000373887 S100A1P23297 94 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms