RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ISG20Q96AZ6 181 aaKnown RBP19.47■□□□□ 0.71
HDAC1-201ENST00000373548 FAR2Q96K12 515 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 P2RY12Q9H244 342 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 HCFC2Q9Y5Z7 792 aa19.47■□□□□ 0.71
HDAC1-201ENST00000373548 TM7SF2O76062 418 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CLDN7O95471 211 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 TSPAN12O95859 305 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 COX4I1P13073 169 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 MYOGP15173 224 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 TSPAN8P19075 237 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 SLC25A3Q00325 362 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 BTKQ06187 659 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 E2F5Q15329 346 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 MYLK3Q32MK0 819 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 ZNF697Q5TEC3 545 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 NXNQ6DKJ4 435 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 FAM151BQ6UXP7 276 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 STK40Q8N2I9 435 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 NKAPQ8N5F7 415 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CPSF7Q8N684 471 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 STAG3L4Q8TBR4 150 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CD200R1Q8TD46 325 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 WDR60Q8WVS4 1066 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 KCNJ9Q92806 393 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 ZSWIM3Q96MP5 696 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 THTPAQ9BU02 230 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 RNPEPL1Q9HAU8 725 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 NKX1-2Q9UD57 310 aaPredicted RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 TRMT6Q9UJA5 497 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 G3BP2Q9UN86 482 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 LOC100653049A0A140TA62 436 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 SKAP2O75563 359 aaPredicted RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 KRT34O76011 436 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 SIX3O95343 332 aaPredicted RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 PRAMEF1O95521 474 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 ESR1P03372 595 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 HNRNPA1P09651 372 aaKnown RBP eCLIP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 PABPC1P11940 636 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CD1EP15812 388 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CA5AP35218 305 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 KPNB1Q14974 876 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 TSNQ15631 228 aaKnown RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 PFKFB4Q16877 469 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 LEMD2Q8NC56 503 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 GRIN3AQ8TCU5 1115 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CCDC97Q96F63 343 aaPredicted RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 CLPTM1LQ96KA5 538 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 FAM161BQ96MY7 647 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 LENG8Q96PV6 779 aaPredicted RBP19.46■□□□□ 0.71
HDAC1-201ENST00000373548 C19orf43Q9BQ61 176 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 SPHK2Q9NRA0 654 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 COMMD10Q9Y6G5 202 aa19.46■□□□□ 0.71
HDAC1-201ENST00000373548 PRRC2BQ5JSZ5 2229 aaKnown RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 LRRC14BA6NHZ5 514 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 CDC7O00311 574 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 BNIP3LO60238 219 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 XYLBO75191 536 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 TYRP14679 529 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 PIK3R1P27986 724 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 GRASPQ7Z6J2 395 aaPredicted RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SCUBE1Q8IWY4 988 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 ULK2Q8IYT8 1036 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 AFAP1L2Q8N4X5 818 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 CATSPER2Q96P56 530 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 IL26Q9NPH9 171 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SLC25A13Q9UJS0 675 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 RNF112Q9ULX5 631 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 NPEPPSL1A6NEC2 478 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SOBPA7XYQ1 873 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 ECI2O75521 394 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 GFAPP14136 432 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 PPARGP37231 505 aaPredicted RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 CDH13P55290 713 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SATB1Q01826 763 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 KHDC1Q4VXA5 237 aaKnown RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 LY6G5CQ5SRR4 150 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 FAM219BQ5XKK7 198 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 CERS6Q6ZMG9 384 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 RAB44Q7Z6P3 723 aaPredicted RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SERPINA9Q86WD7 417 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 FUBP1Q96AE4 644 aaKnown RBP19.45■□□□□ 0.7
HDAC1-201ENST00000373548 ECHDC3Q96DC8 303 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 TUBGCP5Q96RT8 1024 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 MEAF6Q9HAF1 191 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 SLCO3A1Q9UIG8 710 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 TRAF6Q9Y4K3 522 aa19.45■□□□□ 0.7
HDAC1-201ENST00000373548 ANKRD12Q6UB98 2062 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 CHD7Q9P2D1 2997 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 CCDC189A1A4V9 331 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 NPIPB15A6NHN6 443 aaPredicted RBP19.44■□□□□ 0.7
HDAC1-201ENST00000373548 IQCF5A8MTL0 148 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 A8MX80 341 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 SUPT3HB4E1H0 165 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 PRMT5O14744 637 aaPredicted RBP19.44■□□□□ 0.7
HDAC1-201ENST00000373548 PER2O15055 1255 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 SUPT3HO75486 399 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 BPIP17213 487 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 CHRM3P20309 590 aa19.44■□□□□ 0.7
HDAC1-201ENST00000373548 CCNHP51946 323 aaPredicted RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms