RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 ZCCHC18P0CG32 403 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 BMP1P13497 986 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 AGTR2P50052 363 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 RHOAP61586 193 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 ECT2LQ008S8 904 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 RALGDSQ12967 914 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 OGFRL1Q5TC84 451 aaPredicted RBP18.62■□□□□ 0.57
USP49-202ENST00000373010 TAS2R42Q7RTR8 314 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 ARL14EPQ8N8R7 260 aaPredicted RBP18.62■□□□□ 0.57
USP49-202ENST00000373010 ADAMTS19Q8TE59 1207 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 COPS7BQ9H9Q2 264 aaPredicted RBP18.62■□□□□ 0.57
USP49-202ENST00000373010 MRGBPQ9NV56 204 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 VPS51Q9UID3 782 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 K7ERQ8 282 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 VPS26AO75436 327 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 LINC00032P0C843 101 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 CTPS1P17812 591 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 GPX3P22352 226 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 CSKP41240 450 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 ATP6V0D1P61421 351 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 KIF19Q2TAC6 998 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 TXNDC8Q6A555 127 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 OR52E8Q6IFG1 317 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 TMEM169Q96HH4 297 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 SLC25A23Q9BV35 468 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 PCDHAC1Q9H158 963 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 C6orf203Q9P0P8 240 aaPredicted RBP18.62■□□□□ 0.57
USP49-202ENST00000373010 HSFX1Q9UBD0 423 aa18.62■□□□□ 0.57
USP49-202ENST00000373010 CAPN8A6NHC0 703 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 NRP2O60462 931 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TSPAN12O95859 305 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 PYGLP06737 847 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SPATA31D3P0C874 917 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TTPAP49638 278 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 STX1BP61266 288 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TLE2Q04725 743 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 IKBKEQ14164 716 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SPATA31D4Q6ZUB0 917 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SPATA24Q86W54 205 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 LILRA2Q8N149 483 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 OR6K2Q8NGY2 324 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 EEF1AKMT1Q8WVE0 214 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 ESAMQ96AP7 390 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 EID2BQ96D98 161 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TUBGCP5Q96RT8 1024 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SARS2Q9NP81 518 aaKnown RBP18.61■□□□□ 0.57
USP49-202ENST00000373010 BCAP29Q9UHQ4 241 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TRMT6Q9UJA5 497 aaKnown RBP18.61■□□□□ 0.57
USP49-202ENST00000373010 STOML2Q9UJZ1 356 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SARDHQ9UL12 918 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 DTNAQ9Y4J8 743 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 IQCF5A8MTL0 148 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 C9JVG2 144 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 UQCRBP14927 111 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 ATP4BP51164 291 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 LCP2Q13094 533 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TRIM60Q495X7 471 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 ANKS6Q68DC2 871 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 PHYKPLQ8IUZ5 450 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SLC39A11Q8N1S5 342 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 NKAPQ8N5F7 415 aaKnown RBP18.61■□□□□ 0.57
USP49-202ENST00000373010 PHC3Q8NDX5 983 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 CD200R1Q8TD46 325 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 NAT14Q8WUY8 206 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 VWCEQ96DN2 955 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 LINGO1Q96FE5 620 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 SLC39A3Q9BRY0 314 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TM6SF2Q9BZW4 377 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 TIMM22Q9Y584 194 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 OR51B4Q9Y5P0 310 aa18.61■□□□□ 0.57
USP49-202ENST00000373010 MAP3K13O43283 966 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 PEX1O43933 1283 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 GREM1O60565 184 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ALPIP09923 528 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 CHRM3P20309 590 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 PRDX3P30048 256 aaKnown RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 XIAPP98170 497 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ADGRE1Q14246 886 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ZFP1Q6P2D0 407 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 CPNE9Q8IYJ1 553 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 SLC45A3Q96JT2 553 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ZNF558Q96NG5 402 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 PAK6Q9NQU5 681 aaPredicted RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 PCDH10Q9P2E7 1040 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 RIMS3Q9UJD0 308 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 TSR3Q9UJK0 312 aaKnown RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 VPS9D1Q9Y2B5 631 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 NR5A2O00482 541 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 TRIM24O15164 1050 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 RPS17P08708 135 aaKnown RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 HK3P52790 923 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 RAB33AQ14088 237 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ZNF783Q6ZMS7 281 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 LYSMD3Q7Z3D4 306 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 RETREG3Q86VR2 466 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 HJURPQ8NCD3 748 aaPredicted RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 TUBGCP3Q96CW5 907 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 ALG14Q96F25 216 aa18.6■□□□□ 0.57
USP49-202ENST00000373010 CCDC97Q96F63 343 aaPredicted RBP18.6■□□□□ 0.57
USP49-202ENST00000373010 LRGUKQ96M69 825 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms