RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 HM13Q8TCT9 377 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 TSEN15Q8WW01 171 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 BRINP2Q9C0B6 783 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PCDH18Q9HCL0 1135 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 MGAT4AQ9UM21 535 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 RSL1D1O76021 490 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 C9P02748 559 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 FABP3P05413 133 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 TPSB2P20231 275 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CACNG1Q06432 222 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ZNF155Q12901 538 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 TPSAB1Q15661 275 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 AKAP14Q86UN6 197 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ADCY4Q8NFM4 1077 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 IPCEF1Q8WWN9 437 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 BORCS5Q969J3 196 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 LENG1Q96BZ8 264 aaPredicted RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 RBM4BQ9BQ04 359 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 RBM4Q9BWF3 364 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 TNKS2Q9H2K2 1166 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 ACP6Q9NPH0 428 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 NUDT4Q9NZJ9 180 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 MARK1Q9P0L2 795 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CFAP97Q9P2B7 532 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 H3BM21 787 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CLDN5O00501 218 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PLIN3O60664 434 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 PKMP14618 531 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 ITPKAP23677 461 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 KIR3DL1P43629 444 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 KCNJ2P63252 427 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 SP3Q02447 781 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 SF1Q15637 639 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 SLCO6A1Q86UG4 719 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 UBR7Q8N806 425 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 CHCHD6Q9BRQ6 235 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 WDR18Q9BV38 432 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 GSDMCQ9BYG8 508 aa11.49□□□□□ -0.57
VCL-202ENST00000372755 AGO3Q9H9G7 860 aaKnown RBP11.49□□□□□ -0.57
VCL-202ENST00000372755 DDX3YO15523 660 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 FADS2O95864 444 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 SAGP10523 405 aaPredicted RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 UROSP10746 265 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 PCSK2P16519 638 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 LAG3P18627 525 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 CRHR1P34998 444 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 SPAM1P38567 509 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 AP1S2P56377 157 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 C9orf57Q5W0N0 161 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 FATE1Q969F0 183 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MFSD14AQ96MC6 490 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 NPAS2Q99743 824 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MYOCQ99972 504 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 PDP1Q9P0J1 537 aaPredicted RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 GNEQ9Y223 722 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 OAS3Q9Y6K5 1087 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 C5orf60A6NFR6 353 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 RIIAD1A6NNX1 92 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 TLL1O43897 1013 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MPZL2O60487 215 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 EDF1O60869 148 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 KCNA5P22460 613 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 GLUD2P49448 558 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 PDX1P52945 283 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 DLG2Q15700 870 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ALKBH2Q6NS38 261 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ILDR1Q86SU0 546 aaPredicted RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 TMPRSS11BQ86T26 416 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 SLC43A3Q8NBI5 491 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MRPL45Q9BRJ2 306 aaKnown RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 IFT80Q9P2H3 777 aaPredicted RBP11.48□□□□□ -0.57
VCL-202ENST00000372755 LMTK2Q8IWU2 1503 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 FPGTO14772 594 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 LAMP2P13473 410 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 IL18Q14116 193 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 SNAPC1Q16533 368 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ZCCHC12Q6PEW1 402 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 TRABD2AQ86V40 505 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 OR5B17Q8NGF7 314 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 HAS1Q92839 578 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 DNASE1L2Q92874 299 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MNTQ99583 582 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ACAT2Q9BWD1 397 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 FAM105AQ9NUU6 356 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 DNAJC28Q9NX36 388 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 TEX46H3BTG2 121 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 VIPP01282 170 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 THRBP10828 461 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 CLUP10909 449 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 CDH3P22223 829 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 MTHFRP42898 656 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 DNASE1L1P49184 302 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 TAS2R40P59535 323 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 SEMA5AQ13591 1074 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ZBTB6Q15916 424 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 PLA2G4EQ3MJ16 856 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 PRAMEF19Q5SWL8 479 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 ULK3Q6PHR2 472 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 KLHL5Q96PQ7 755 aa11.48□□□□□ -0.57
VCL-202ENST00000372755 HTATIP2Q9BUP3 242 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms