RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 COLQQ9Y215 455 aaPredicted RBP16.71■□□□□ 0.27
PHGDH-202ENST00000369409 FAM50BQ9Y247 325 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 MED16Q9Y2X0 877 aa16.71■□□□□ 0.27
PHGDH-202ENST00000369409 TRBV5-4A0A0C4DH59 114 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 GRXCR2A6NFK2 248 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 NIPSNAP2O75323 286 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 EPHX1P07099 455 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 SBK3P0C264 359 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 MYL2P10916 166 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 PKMP14618 531 aaKnown RBP16.7■□□□□ 0.26
PHGDH-202ENST00000369409 ZNF37AP17032 561 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UGT1A6P19224 532 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UGT1A1P22309 533 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UGT1A4P22310 534 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 NFKBIAP25963 317 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UGT1A3P35503 534 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UGT1A5P35504 534 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 PTGER3P43115 390 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 SPINT3P49223 89 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 OVGP1Q12889 678 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 FAM83EQ2M2I3 478 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 CERS6Q6ZMG9 384 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 CCDC91Q7Z6B0 441 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 TMEM151AQ8N4L1 468 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 RDH11Q8TC12 318 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 UBXN10Q96LJ8 280 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 GAS2L1Q99501 681 aaPredicted RBP16.7■□□□□ 0.26
PHGDH-202ENST00000369409 POPDC3Q9HBV1 291 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 TAS2R13Q9NYV9 303 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 PKD2L2Q9NZM6 624 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 CD84Q9UIB8 345 aa16.7■□□□□ 0.26
PHGDH-202ENST00000369409 MMP12P39900 470 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 RALGDSQ12967 914 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ITGA9Q13797 1035 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 TECRLQ5HYJ1 363 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 AGAP9Q5VTM2 703 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ZYG11AQ6WRX3 759 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 DPPA4Q7L190 304 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ZNF398Q8TD17 642 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 HCAR2Q8TDS4 363 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ARRDC3Q96B67 414 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 PLEKHG4BQ96PX9 1271 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 GPR21Q99679 349 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 P2RY12Q9H244 342 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 MRPL46Q9H2W6 279 aaKnown RBP16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ITM2BQ9Y287 266 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 SOX1O00570 391 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-202ENST00000369409 IL1BP01584 269 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 RALBP11234 206 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ITGB7P26010 798 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ACRV1P26436 265 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 PPARGP37231 505 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-202ENST00000369409 PTPN5P54829 565 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 STX3Q13277 289 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 GPR33Q49SQ1 333 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 KLC3Q6P597 504 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 NUDT18Q6ZVK8 323 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 HSD11B1LQ7Z5J1 315 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 TMIEQ8NEW7 156 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 FAM129BQ96TA1 746 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 MRPL57Q9BQC6 102 aaKnown RBP16.69■□□□□ 0.26
PHGDH-202ENST00000369409 BOCQ9BWV1 1114 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 ZNF395Q9H8N7 513 aaPredicted RBP16.69■□□□□ 0.26
PHGDH-202ENST00000369409 NPHS2Q9NP85 383 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 PPM1HQ9ULR3 514 aa16.69■□□□□ 0.26
PHGDH-202ENST00000369409 TARM1B6A8C7 271 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 C2CD4DB7Z1M9 353 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 PRMT5O14744 637 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-202ENST00000369409 VPS26AO75436 327 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 ESR1P03372 595 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 SERPINE1P05121 402 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 KCNA5P22460 613 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 SLC26A3P40879 764 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 WASP42768 502 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 RGS19P49795 217 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 GALK1P51570 392 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 ADARP55265 1226 aaKnown RBP16.68■□□□□ 0.26
PHGDH-202ENST00000369409 OCRLQ01968 901 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 SETMARQ53H47 684 aaPredicted RBP16.68■□□□□ 0.26
PHGDH-202ENST00000369409 ZDHHC20Q5W0Z9 365 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 ERAP2Q6P179 960 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 RBFAQ8N0V3 343 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 NXPE1Q8N323 547 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 ANKS4BQ8N8V4 417 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 NAT14Q8WUY8 206 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 SGF29Q96ES7 293 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 C7orf26Q96N11 449 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 TTC1Q99614 292 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 P2RY13Q9BPV8 354 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 CLPBQ9H078 707 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 GALPQ9UBC7 116 aa16.68■□□□□ 0.26
PHGDH-202ENST00000369409 PLK4O00444 970 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SNNO75324 88 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 LYPLA1O75608 230 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 TROVE2P10155 538 aaKnown RBP eCLIP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ZNF7P17097 686 aaPredicted RBP16.67■□□□□ 0.26
PHGDH-202ENST00000369409 TFEBP19484 476 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 PSMD8P48556 350 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 SEC13P55735 322 aa16.67■□□□□ 0.26
PHGDH-202ENST00000369409 ITIH4Q14624 930 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms