RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 CDK18Q07002 472 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 HECTD2Q5U5R9 776 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 FAM46CQ5VWP2 391 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 HPS1Q92902 700 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 FUCA2Q9BTY2 467 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 NWD1Q149M9 1564 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 MFSD11O43934 449 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 C1RP00736 705 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 ITGAVP06756 1048 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 KCNA5P22460 613 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 GALK1P51570 392 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 SULT1C3Q6IMI6 304 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 PYROXD2Q8N2H3 581 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 ZMIZ2Q8NF64 920 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 C1GALT1C1Q96EU7 318 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 P2RY11Q96G91 374 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 TBC1D24Q9ULP9 559 aa18.1■□□□□ 0.49
SNX27-202ENST00000368841 GRM6O15303 877 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 IL12AP29459 219 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 ATCAYQ86WG3 371 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 SIDT2Q8NBJ9 832 aaKnown RBP18.09■□□□□ 0.49
SNX27-202ENST00000368841 KCNN2Q9H2S1 579 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 MMADHCQ9H3L0 296 aaPredicted RBP18.09■□□□□ 0.49
SNX27-202ENST00000368841 CRYBB1P53674 252 aaPredicted RBP18.09■□□□□ 0.49
SNX27-202ENST00000368841 BHLHB9Q6PI77 547 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 FRRS1Q6ZNA5 592 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 AP2M1Q96CW1 435 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 TCRBV9S1A1TA0A576 114 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 GNALP38405 381 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 CLCNKBP51801 687 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 UNC93AQ86WB7 457 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 CD99L2Q8TCZ2 262 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 WDR60Q8WVS4 1066 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 DPEP2Q9H4A9 486 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 CTSKP43235 329 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 RBFAQ8N0V3 343 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 CPA6Q8N4T0 437 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 ZBTB2Q8N680 514 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 NXNL1Q96CM4 212 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 DHRS1Q96LJ7 313 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 GIT1Q9Y2X7 761 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 PRR5-ARHGAP8B1AHC4 643 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 MMP3P08254 477 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 NCK1P16333 377 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 ARHGAP8P85298 464 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 PIK3C3Q8NEB9 887 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 ARNTL2Q8WYA1 636 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 GTPBP3Q969Y2 492 aaKnown RBP18.09■□□□□ 0.49
SNX27-202ENST00000368841 AZIN2Q96A70 460 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 HTATIP2Q9BUP3 242 aa18.09■□□□□ 0.49
SNX27-202ENST00000368841 SERPINB7O75635 380 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 S100GP29377 79 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 ATXN1P54253 815 aaKnown RBP18.08■□□□□ 0.49
SNX27-202ENST00000368841 LSM12Q3MHD2 195 aaKnown RBP18.08■□□□□ 0.49
SNX27-202ENST00000368841 AMZ1Q400G9 498 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 ZNF613Q6PF04 617 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 CHSY3Q70JA7 882 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 DHDDSQ86SQ9 333 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 FATE1Q969F0 183 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.08■□□□□ 0.49
SNX27-202ENST00000368841 CEMIPQ8WUJ3 1361 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 E9PAM4 449 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 VIPP01282 170 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 COPS8Q99627 209 aa18.08■□□□□ 0.49
SNX27-202ENST00000368841 EBNA1BP2Q99848 306 aaKnown RBP18.08■□□□□ 0.49
SNX27-202ENST00000368841 OR1F1O43749 312 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 FSBPO95073 299 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ZNF846Q147U1 533 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 C17orf64Q86WR6 236 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ART4Q93070 314 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ERVK-5Q9HDB9 667 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 KCNMB3Q9NPA1 279 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 CTPS2Q9NRF8 586 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 RAI2Q9Y5P3 530 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ACTL7BQ9Y614 415 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 A0A1W2PRG6 482 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 FAM149AA5PLN7 773 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 SIM2Q14190 667 aaPredicted RBP18.08■□□□□ 0.48
SNX27-202ENST00000368841 ACAP2Q15057 778 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 QPCTQ16769 361 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 CHST15Q7LFX5 561 aaPredicted RBP18.08■□□□□ 0.48
SNX27-202ENST00000368841 COX4I2Q96KJ9 171 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 SEC14L3Q9UDX4 400 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 RAP2CQ9Y3L5 183 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 LOC110117498-PIK3R3F6TDL0 507 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 XKRYO14609 159 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 SMAD9O15198 467 aaKnown RBP18.08■□□□□ 0.48
SNX27-202ENST00000368841 TREHO43280 583 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ACRP10323 421 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 HSPA7P48741 367 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ARFIP1P53367 373 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 VPS26BQ4G0F5 336 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ADAMTS15Q8TE58 950 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 PTCD3Q96EY7 689 aaKnown RBP18.08■□□□□ 0.48
SNX27-202ENST00000368841 TBX5Q99593 518 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 TTPALQ9BTX7 342 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 ELAC1Q9H777 363 aaKnown RBP18.08■□□□□ 0.48
SNX27-202ENST00000368841 DENND5AQ6IQ26 1287 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 GPR135Q8IZ08 494 aa18.08■□□□□ 0.48
SNX27-202ENST00000368841 SPATA22Q8NHS9 363 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms