RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 COL6A2P12110 1019 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UGT1A6P19224 532 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UGT1A1P22309 533 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UGT1A4P22310 534 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UGT1A3P35503 534 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UGT1A5P35504 534 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 PTGER3P43115 390 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 KIR2DL1P43626 348 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 GLRBP48167 497 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 PTPN5P54829 565 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 CKAP5Q14008 2032 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 C2orf27AQ580R0 203 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 CENPLQ8N0S6 344 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 C1QTNF1Q9BXJ1 281 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 NMRAL1Q9HBL8 299 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 RUVBL2Q9Y230 463 aaKnown RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 MYO10Q9HD67 2058 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 PLK4O00444 970 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 SYNCRIPO60506 623 aaKnown RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 RHOBTB1O94844 696 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 PROCP04070 461 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 FDXRP22570 491 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 HSD11B1LQ7Z5J1 315 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 LCA5Q86VQ0 697 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 SPATA6LQ8N4H0 392 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 ZNF75CPQ92670 426 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 SCYL1Q96KG9 808 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 UNKQ9C0B0 810 aaKnown RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 C8orf33Q9H7E9 229 aaPredicted RBP19.32■□□□□ 0.68
CHTOP-204ENST00000368694 FGFR1OP2Q9NVK5 253 aa19.32■□□□□ 0.68
CHTOP-204ENST00000368694 EGFP01133 1207 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ADRB3P13945 408 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 RALGDSQ12967 914 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 PDAP1Q13442 181 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ENPP2Q13822 863 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 CSHL1Q14406 222 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 DBN1Q16643 649 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 GPR33Q49SQ1 333 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 FAM47EQ6ZV65 393 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 NUDCD3Q8IVD9 361 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 DNASE1L2Q92874 299 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 NXNL1Q96CM4 212 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 BIRC8Q96P09 236 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 WRAP53Q9BUR4 548 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 NSRP1Q9H0G5 558 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 YY1AP1Q9H869 796 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 MANSC1Q9H8J5 431 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 TAS2R13Q9NYV9 303 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 FAM50BQ9Y247 325 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 PLXNB3Q9ULL4 1909 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 PLXNA2O75051 1894 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 NEMP1O14524 444 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 RNASEH1O60930 286 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 KLHL2O95198 593 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 CCDC166P0CW27 439 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 BGNP21810 368 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ACRV1P26436 265 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ETV3P41162 512 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ELP6Q0PNE2 266 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 SMAD2Q15796 467 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 TSNAXIP1Q2TAA8 658 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 FAM46CQ5VWP2 391 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 LYPLAL1Q5VWZ2 237 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 SPNS2Q8IVW8 549 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 ZNF473Q8WTR7 871 aaKnown RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 SPATA16Q9BXB7 569 aa19.31■□□□□ 0.68
CHTOP-204ENST00000368694 CAMSAP3Q9P1Y5 1249 aaPredicted RBP19.31■□□□□ 0.68
CHTOP-204ENST00000368694 BPGMP07738 259 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 PKMP14618 531 aaKnown RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 ZNF7P17097 686 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 DRD4P21917 467 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 CA5AP35218 305 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 GRSF1Q12849 480 aaKnown RBP eCLIP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 ITGA9Q13797 1035 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 FAM83EQ2M2I3 478 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 PRPF38BQ5VTL8 546 aaKnown RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 SDE2Q6IQ49 451 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 LIPIQ6XZB0 460 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 RGS9BPQ6ZS82 235 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 Q6ZVL8 140 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 ERN2Q76MJ5 926 aaKnown RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 CLPBQ9H078 707 aa19.3■□□□□ 0.68
CHTOP-204ENST00000368694 CPSF2Q9P2I0 782 aaKnown RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 MTF2Q9Y483 593 aaPredicted RBP19.3■□□□□ 0.68
CHTOP-204ENST00000368694 TRBV5-4A0A0C4DH59 114 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 E5RI56 91 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 PRMT5O14744 637 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-204ENST00000368694 BIRC5O15392 142 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 NARSO43776 548 aaKnown RBP19.29■□□□□ 0.68
CHTOP-204ENST00000368694 ESR1P03372 595 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 NTSR1P30989 418 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 KPNA2P52292 529 aaKnown RBP19.29■□□□□ 0.68
CHTOP-204ENST00000368694 ADARP55265 1226 aaKnown RBP19.29■□□□□ 0.68
CHTOP-204ENST00000368694 DLG1Q12959 904 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 CAMK2GQ13555 558 aaPredicted RBP19.29■□□□□ 0.68
CHTOP-204ENST00000368694 ACOX1Q15067 660 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 ATP13A5Q4VNC0 1218 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 TMEM196Q5HYL7 178 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 LRRC8EQ6NSJ5 796 aa19.29■□□□□ 0.68
CHTOP-204ENST00000368694 CCDC91Q7Z6B0 441 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms