RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 AP2M1Q96CW1 435 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 SMC6Q96SB8 1091 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 GPR22Q99680 433 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 SGK2Q9HBY8 427 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 ITM2CQ9NQX7 267 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 CD84Q9UIB8 345 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 COMMD10Q9Y6G5 202 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 NCOR1O75376 2440 aa12.24□□□□□ -0.45
TUBE1-202ENST00000368662 H3BQF6 201 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ZNF7P17097 686 aaPredicted RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ACRV1P26436 265 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 TPMTP51580 245 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ADPRHP54922 357 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ITIH4Q14624 930 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 MAP7D1Q3KQU3 841 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SETMARQ53H47 684 aaPredicted RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 LDB1Q86U70 411 aaPredicted RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SERPINA9Q86WD7 417 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SRRM1Q8IYB3 904 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 RBFAQ8N0V3 343 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 NXPE1Q8N323 547 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ACMSDQ8TDX5 336 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 LPGAT1Q92604 370 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SCAMP4Q969E2 229 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ISL2Q96A47 359 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ALKBH8Q96BT7 664 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 VPS35Q96QK1 796 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 BTBD1Q9H0C5 482 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ABCG8Q9H221 673 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 CCDC68Q9H2F9 335 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 USP36Q9P275 1121 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 HMX2A2RU54 273 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 GOLGA8CPA6NN73 597 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ZNF217O75362 1048 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 IGLV3-19P01714 112 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 GM2AP17900 193 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SERPINB8P50452 374 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 POU4F1Q01851 419 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ATP13A5Q4VNC0 1218 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 FAM45BPQ6NSW5 357 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 CNSTQ6PJW8 725 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 EXOC3L1Q86VI1 746 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 KRT222Q8N1A0 295 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 PIAS4Q8N2W9 510 aaPredicted RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 DCLK2Q8N568 766 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 FAM45AQ8TCE6 357 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 HEXDCQ8WVB3 486 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 EDAQ92838 391 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 ATXN7L3BQ96GX2 97 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 RIOK2Q9BVS4 552 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 C1QTNF7Q9BXJ2 289 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 FAM96AQ9H5X1 160 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 SSU72Q9NP77 194 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 MTO1Q9Y2Z2 717 aaKnown RBP12.23□□□□□ -0.45
TUBE1-202ENST00000368662 PCDHB1Q9Y5F3 818 aa12.23□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3DA0A087WVF3 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3IA0A087WXS9 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3EA0A087X179 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3KA0A087X1G2 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 FAM95CA0A1B0GW59 222 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UBA6A0AVT1 1052 aaPredicted RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3FA6NER0 549 aaPredicted RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 LRRC72A6NJI9 287 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3LB9A6J9 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 PRMT5O14744 637 aaPredicted RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3HP0C7X1 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 PRSS56P0CW18 603 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 KRT4P19013 534 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UGT1A6P19224 532 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UGT1A1P22309 533 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UGT1A4P22310 534 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TYK2P29597 1187 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 OXTRP30559 389 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UGT1A3P35503 534 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 UGT1A5P35504 534 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 CDKN1CP49918 316 aaPredicted RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 SLC12A2P55011 1212 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 SGCGQ13326 291 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3GQ6DHY5 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3CQ6IPX1 549 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ANO7Q6IWH7 933 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 RFLNAQ6ZTI6 216 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 HORMAD1Q86X24 394 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TBC1D3Q8IZP1 549 aaPredicted RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 CAMKK1Q8N5S9 505 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 GPATCH11Q8N954 259 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 TSPAN17Q96FV3 270 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 COPS8Q99627 209 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ZDHHC3Q9NYG2 299 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 CRYL1Q9Y2S2 319 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 COQ6Q9Y2Z9 468 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 IGLON5A6NGN9 336 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 APBB3O95704 486 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ESR1P03372 595 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 ALDOAP04075 364 aaKnown RBP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 STMN1P16949 149 aa12.22□□□□□ -0.45
TUBE1-202ENST00000368662 RPS3P23396 243 aaKnown RBP eCLIP12.22□□□□□ -0.45
TUBE1-202ENST00000368662 OAS2P29728 719 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms