RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 TCRBV7S3A2A0A539 114 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 CCL22O00626 93 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TRIM38O00635 465 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 TNFRSF10CO14798 259 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 LDB2O43679 373 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 PYGLP06737 847 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 CEACAM1P13688 526 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 LPOP22079 712 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 KELP23276 732 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 SPAM1P38567 509 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 FNTAP49354 379 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 POU6F1Q14863 301 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 ATP13A5Q4VNC0 1218 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 ZNF648Q5T619 568 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 FAM151BQ6UXP7 276 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 DGLUCYQ7Z3D6 616 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 LINC00523Q86TU6 105 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 CEP112Q8N8E3 955 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 BTN2A2Q8WVV5 523 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 ZSCAN5AQ9BUG6 496 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 FEZ2Q9UHY8 353 aaPredicted RBP14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 SLC17A4Q9Y2C5 497 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 PKP3Q9Y446 797 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 DGKBQ9Y6T7 804 aa14.97□□□□□ -0.01
SMPDL3A-201ENST00000368440 ARID1BQ8NFD5 2236 aaPredicted RBP14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CTAGE15A4D2H0 777 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 STX7O15400 261 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 TNFP01375 233 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CTAGE8P0CG41 777 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 ZNF140P52738 457 aaPredicted RBP14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 TMPRSS15P98073 1019 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 GPS1Q13098 491 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 SEPT6Q14141 434 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CHRNA6Q15825 494 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 ERCC6LQ2NKX8 1250 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 DEFB133Q30KQ1 61 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CERCAMQ5T4B2 595 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 C4orf22Q6V702 233 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 PPP1R21Q6ZMI0 780 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 MARK2Q7KZI7 788 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CTAGE6Q86UF2 777 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CTAGE4Q8IX94 777 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 DNAAF3Q8N9W5 541 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 TMEM168Q9H0V1 697 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CDH19Q9H159 772 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CARS2Q9HA77 564 aaKnown RBP14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CASS4Q9NQ75 786 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 SPASTQ9UBP0 616 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 FKBPLQ9UIM3 349 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 SUFUQ9UMX1 484 aa14.96□□□□□ -0.01
SMPDL3A-201ENST00000368440 CCDC78A2IDD5 438 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 C2orf81A6NN90 581 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 SIGLEC6O43699 453 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CRTAMO95727 393 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CTSEP14091 401 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 GNPDA1P46926 289 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 BLKP51451 505 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CDH17Q12864 832 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 TRIP6Q15654 476 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 INAVAQ3KP66 663 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 KHDC1Q4VXA5 237 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CCDC38Q502W7 563 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 OR4C6Q8NH72 309 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CCL4L1Q8NHW4 92 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 DNAJC1Q96KC8 554 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 EIF2B3Q9NR50 452 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 ST14Q9Y5Y6 855 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 SPEGQ15772 3267 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 GLYATL1P3A0A0U1RQE8 302 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CTIFO43310 598 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A9O60656 530 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 MTX2O75431 263 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 ASMTLO95671 621 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 MYF5P13349 255 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A6P19224 532 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A1P22309 533 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A4P22310 534 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A3P35503 534 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A5P35504 534 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CKAP4Q07065 602 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 C2orf54Q08AI8 447 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 KCNJ11Q14654 390 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 ANKRD22Q5VYY1 191 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 ZNF534Q76KX8 674 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 KLHL7Q8IXQ5 586 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 GLYATL1Q969I3 302 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CNDP2Q96KP4 475 aaKnown RBP14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 TBATAQ96M53 351 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A7Q9HAW7 530 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A10Q9HAW8 530 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 UGT1A8Q9HAW9 530 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 FTSJ1Q9UET6 329 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 PLEKHM1Q9Y4G2 1056 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 CSNK1G3Q9Y6M4 447 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 PCNX2A6NKB5 2137 aa14.95□□□□□ -0.02
SMPDL3A-201ENST00000368440 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 DNAJC6O75061 913 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 SLC25A14O95258 325 aaPredicted RBP14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 ECEL1O95672 775 aa14.94□□□□□ -0.02
SMPDL3A-201ENST00000368440 IVLP07476 585 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms